KEGG T01001: 8500

Homo sapiens (human): 8500

Entry

8500 CDS T01001

Gene name

PPFIA1, LIP.1, LIP1, LIPRIN

Definition

protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1

Organism

hsa Homo sapiens (human)

Class

SSDB

Motif

Pfam:

SAM_1 SAM_2

Other DBs

NCBI-GI:

NCBI-GeneID:

OMIM:

HGNC:

HPRD:

Ensembl:

Vega:

UniProt:

Position

11q13.3

AA seq 1202 aa
MMCEVMPTISEAEGPPGGGGGHGSGSPSQPDADSHFEQLMVSMLEERDRLLDTLRETQET
LALTQGKLHEVGHERDSLQRQLNTALPQEFAALTKELNVCREQLLEREEEIAELKAERNN
TRLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSSEVEVLKALKSLFEHHKALDEKVRE
RLRVALERCSLLEEELGATHKELMILKEQNNQKKTLTDGVLDINHEQENTPSTSGKRSSD
GSLSHEEDLAKVIELQEIISKQSREQSQMKERLASLSSHVTELEEDLDTARKDLIKSEEM
NTKLQRDVREAMAQKEDMEERITTLEKRYLAAQREATSVHDLNDKLENEIANKDSMHRQT
EDKNRQLQERLELAEQKLQQTLRKAETLPEVEAELAQRVAALSKAEERHGNIEERLRQME
AQLEEKNQELQRARQREKMNEEHNKRLSDTVDKLLSESNERLQLHLKERMAALEDKNSLL
REVESAKKQLEETQHDKDQLVLNIEALRAELDHMRLRGASLHHGRPHLGSVPDFRFPMAD
GHTDSYSTSAVLRRPQKGRLAALRDEPSKVQTLNEQDWERAQQASVLANVAQAFESDADV
SDGEDDRDTLLSSVDLLSPSGQADAHTLAMMLQEQLDAINKEIRLIQEEKENTEQRAEEI
ESRVGSGSLDNLGRFRSMSSIPPYPASSLASSSPPGSGRSTPRRIPHSPAREVDRLGVMT
LLPPSREEVRDDKTTIKCETSPPSSPRALRLDRLHKGALHTVSHEDIRDIRNSTGSQDGP
VSNPSSSNSSQDSLHKAPKKKGIKSSIGRLFGKKEKGRPGQTGKEALGQAGVSETDNSSQ
DALGLSKLGGQAEKNRKLQKKHELLEEARRQGLPFAQWDGPTVVVWLELWVGMPAWYVAA
CRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEIMSLTSPSAPPTSRTTLAYG
DMNHEWIGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRGQLKMVDSFHRNSFQCG
IMCLRRLNYDRKELERKREESQSEIKDVLVWSNDRVIRWILSIGLKEYANNLIESGVHGA
LLALDETFDFSALALLLQIPTQNTQARAVLEREFNNLLVMGTDRRFDEDDDKSFRRAPSW
RKKFRPKDIRGLAAGSAETLPANFRVTSSMSSPSMQPKKMQMDGNVSGTQRLDSATVRTY
SC

NT seq 3609 nt +upstreamnt +downstreamnt
atgatgtgcgaggtgatgccgaccatcagcgaagcagaaggcccccctggaggaggtgga
ggccatggttccggctccccttcacagccagatgcagattcacattttgaacagttgatg
gtctccatgctagaagaaagggaccgccttcttgatacactgagagagactcaagaaacg
ctggccttaacccaggggaagttacacgaggttggtcatgaaagagattccttgcagaga
cagctcaacacggcacttccacaggagttcgcagcacttactaaagaactcaatgtatgc
agggaacagctccttgaaagggaagaagaaattgctgaactgaaagcagaaaggaataac
accaggctgctgttagagcatttggaatgccttgtctccaggcatgagcggtctcttagg
atgaccgtggtgaagagacaagcgcagtctccagcaggcgtgtccagcgaagtggaagtg
ctgaaagcactgaagtccttatttgaacaccacaaagctctggatgaaaaggtgagagag
cgattacgagtagcacttgaaagatgtagtttgttagaagaggaattaggtgccacacac
aaagagctaatgattcttaaagaacagaataatcagaaaaaaactctaacagatggagtg
ctggacataaaccatgaacaagaaaatacaccaagcacgagtggaaagagatcttctgat
ggttctttaagccacgaggaagaccttgctaaagtaattgagctccaagaaatcataagt
aagcagtcaagggaacagagccaaatgaaagaacgcctggcttccctttccagtcatgtg
acagaactggaagaggatctggacacggctagaaaagatctcatcaaatctgaagaaatg
aacacaaaattgcaacgagatgtccgtgaagccatggcccaaaaggaagatatggaagag
agaatcactactcttgaaaaacgctacctcgctgcacagcgtgaagccacatctgtgcat
gacctcaatgataaacttgaaaatgaaattgcaaataaagattctatgcatcgacagact
gaagataaaaaccgccagttacaggagcgcttggaattggcagagcaaaagctgcaacag
acactgaggaaggcagagacgctcccggaggtggaggcggagctggcccagagggtggca
gcgctttccaaggctgaagagagacacggcaacattgaagaaaggttacgacagatggaa
gcacagttggaggagaagaatcaagaactgcagcgggcaaggcaaagagaaaaaatgaac
gaagaacataataaacgtttatcagacactgttgacaagctgctttcagaatctaatgag
aggcttcaacttcatcttaaagagagaatggctgctttggaagataagaactctctttta
agagaagttgaaagtgcaaaaaagcagttagaagaaacacaacacgataaggatcagctt
gtcctaaacattgaagcactgagggctgaactagaccacatgagactaagaggtgcttca
cttcatcatggccgaccccacttgggcagtgtcccagatttcaggttccccatggcagac
ggccacacagactcctacagcaccagtgcagtgctgcggcgcccacagaaaggccggctg
gcagccctgcgagatgagccttccaaggtacaaactcttaatgagcaggattgggaacgt
gcccagcaagctagtgtcttggcaaatgtagcacaagcattcgagagtgatgctgacgtg
tctgatggtgaagatgacagggacactctcctcagctcagttgacctgctatcgcccagc
gggcaggccgacgcgcacacactagccatgatgcttcaggagcagctggacgccatcaac
aaagagatcaggttgattcaggaagaaaaagaaaatacagagcagcgggcagaggagatt
gaaagtcgagttggcagtggaagtctagacaatcttggtcgttttagatcaatgagctcc
attcccccctaccctgcttcctcgcttgctagctcctcccctccgggcagtgggcgctcc
accccacgaaggatccctcacagcccagctcgggaagtggacagactgggcgtcatgacc
cttttgccaccttccagagaagaggtacgagatgacaagacaaccataaagtgtgaaacc
tccccgccttcctccccgagagcccttcggttagaccggctgcacaaaggggcgctgcac
accgtcagccacgaggacatcagggacataaggaactccacaggctcccaggatggtccc
gtgagcaaccccagcagtagcaacagtagccaggactcgctccacaaagccccaaagaag
aaaggcattaagtcctccattggccgcttgtttggcaagaaagaaaagggccgacctgga
caaactggcaaagaagcattaggacaagctggtgtttccgagacggataactcatctcag
gatgccttgggacttagcaaattggggggacaggctgaaaaaaatcgtaaacttcaaaaa
aagcatgaattgctggaggaagcccggagacaaggtttaccttttgcccaatgggacggg
ccaacggttgtggtctggctagagctctgggttgggatgccagcctggtatgtggctgcc
tgccgagcaaacgtgaaaagcggggccatcatgtcggccctgtccgacacagagatccag
cgtgagattggcatcagcaaccccctgcacaggctgaagctgaggctggccatccaggag
atcatgtcgctgaccagcccgtctgccccgcccacatctagaacgacactcgcctatggg
gacatgaaccacgagtggatcggcaacgagtggctccccagcctgggcctcccccagtac
cgcagctacttcatggagtgccttgtagacgccaggatgctggaccacttgaccaagaaa
gaccttcgagggcagctgaaaatggtcgacagttttcacagaaacagtttccagtgtgga
attatgtgcctgagaaggttaaattatgaccggaaagaactggaaagaaaaagagaagaa
agtcagagtgaaataaaagacgtgcttgtttggagcaatgatcgagtgattcgctggatc
ctgtcaattggccttaaagaatatgcaaacaatcttatagagagtggtgttcacggagca
cttctggccttagatgaaaccttcgacttcagtgcactggcactgctgttacagatcccg
acgcagaacacacaggctcgtgctgtcttggaaagagaatttaacaaccttttggtcatg
gggactgatagaaggtttgatgaagatgatgataaaagctttaggagagcaccttcatgg
agaaaaaagtttagaccaaaggacattcgtggcttagctgctgggtcagcagagactctc
cctgcaaacttccgggtgacttcttctatgtcttccccctctatgcagccaaagaagatg
cagatggacggcaatgtatcaggaacacagaggttggattctgctacagtcaggacttac
tcctgctaa

All links

Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   NCBI-Gene (1)   
   NCBI-GI (9)   
   UniGene (2)   
   HGNC (1)   
   HPRD (1)   
   ENSEMBL-HSA (1)   
   OC (1)   
   VEGA (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (27)   
   RefSeq(nuc) (3)   
   GenBank (12)   
   EMBL (12)   
Protein domain (2)   
   Pfam (2)   
All databases (52)   

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