KEGG T01001: 11052

Homo sapiens (human): 11052

Entry

11052 CDS T01001

Gene name

CPSF6, CFIM, CFIM68, HPBRII-4, HPBRII-7

Definition

cleavage and polyadenylation specific factor 6, 68kDa

Orthology

K14398

cleavage and polyadenylation specificity factor subunit 6/7

Organism

hsa Homo sapiens (human)

Pathway

hsa03015

mRNA surveillance pathway

Class

Genetic Information Processing; Translation; mRNA surveillance pathway [PATH:hsa03015]

SSDB

Motif

Pfam:

RRM_6 RRM_1

Other DBs

NCBI-GI:

NCBI-GeneID:

OMIM:

HGNC:

Ensembl:

Vega:

UniProt:

Structure

PDB:

3P5T 3Q2S 3P6Y 3Q2T

Position

12q15

AA seq 551 aa
MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTV
GDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRAN
GQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQM
SGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRPP
LGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPV
PGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPA
FFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPPGREMDTARTPLSEAEFEEIMNR
NRAISSSAISRAVSDASAGDYGSAIETLVTAISLIKQSKVSADDRCKVLISSLQDCLHGI
ESKSYGSGSRRERSRERDHSRSREKSRRHKSRSRDRHDDYYRERSRERERHRDRDRDRDR
ERDREREYRHR

NT seq 1656 nt +upstreamnt +downstreamnt
atggcggacggcgtggaccacatagacatttacgcggatgtcggcgaagagttcaaccag
gaagctgaatatggtgggcatgatcagatagatttgtatgacgatgtcatatctccatct
gcaaataatggagatgccccagaagaccgagattacatggatactctcccaccaactgtt
ggtgatgatgtgggtaaaggagcagcaccaaatgttgtctatacatatactggaaagaga
attgcattatatattggaaatctaacatggtggacaacagatgaagacttaactgaagca
gttcattctttgggagtaaatgatattttggagataaaattttttgaaaatcgggcaaat
ggccagtcaaaggggtttgcccttgttggtgttggatctgaagcatcttcaaaaaagtta
atggatctgttacctaaaagagaacttcatggtcagaatcctgttgtaactccatgcaat
aaacagttcctgagtcaatttgaaatgcagtccaggaaaactacacaatcaggacaaatg
tctggggaaggtaaagctggtcctccaggaggcagttcccgtgcagcatttccacaaggt
ggtagaggacggggccgttttccaggggctgttcctggtggggacagatttcctgggcca
gcaggaccaggagggccacccccaccttttccagctggacagactccaccacgtccaccc
ttaggtcctccaggcccacctggtccaccaggtcctccacctcctggtcaggttctgcct
cctcctctagctgggcctcctaatcgaggagatcgccctccaccaccagttctttttcct
ggacaaccttttgggcagcctccattgggtccacttcctcctggccctccacctccagtt
ccaggctacggcccccctcctggcccaccacctccacaacagggaccacctccacctcca
ggcccctttccacctcgtccacccggtccacttgggccaccccttacactagctcctcct
ccgcatcttcctggaccacctccaggtgccccaccgccagctccgcatgtgaacccagct
ttctttcctccaccaactaacagtggcatgcctacatcagatagccgaggtccaccacca
acagatccatatgggcgacctccaccatatgataggggtgactatggcccccctggaagg
gaaatggatactgcaagaacgccattgagtgaagctgaatttgaagaaatcatgaataga
aatagggcaatctcaagcagtgctatttcgagagctgtgtctgatgccagtgctggtgat
tatgggagtgctattgagacactggtaactgcaatttctttaattaaacaatccaaagta
tctgctgatgatcgttgcaaagttcttattagttctttgcaagattgccttcatggaatt
gagtccaagtcttatggttctggatcaagacgtgaacgatcaagagagagggaccatagt
agatcacgagaaaagagtcgacgtcataaatcccgtagtagagaccgtcatgacgattat
tacagagagagaagcagagaacgagagaggcaccgggatcgtgaccgagaccgtgaccga
gagcgtgaccgagagcgcgaatatcgtcatcgttag

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (9)   
   UniGene (1)   
   HGNC (1)   
   ENSEMBL-HSA (1)   
   OC (1)   
   VEGA (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (27)   
   RefSeq(nuc) (1)   
   GenBank (13)   
   EMBL (13)   
3D Structure (4)   
   PDB (4)   
Protein domain (2)   
   Pfam (2)   
All databases (54)   

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