KEGG   Homo sapiens (human): 1301Help
Entry
1301              CDS       T01001                                 

Gene name
COL11A1, CO11A1, COLL6, STL2
Definition
collagen, type XI, alpha 1
Orthology
K06236  
collagen, type I/II/III/V/XI/XXIV/XXVII, alpha
Organism
hsa  Homo sapiens (human)
Pathway
PI3K-Akt signaling pathway
Focal adhesion
ECM-receptor interaction
Platelet activation
Protein digestion and absorption
Amoebiasis
Disease
H00519  
Type XI collagenopathies
H00805  
Vitreoretinal degeneration
Brite
KEGG Orthology (KO) [BR:hsa00001]
 Environmental Information Processing
  Signal transduction
   04151 PI3K-Akt signaling pathway
    1301 (COL11A1)
  Signaling molecules and interaction
   04512 ECM-receptor interaction
    1301 (COL11A1)
 Cellular Processes
  Cell communication
   04510 Focal adhesion
    1301 (COL11A1)
 Organismal Systems
  Immune system
   04611 Platelet activation
    1301 (COL11A1)
  Digestive system
   04974 Protein digestion and absorption
    1301 (COL11A1)
 Human Diseases
  Infectious diseases
   05146 Amoebiasis
    1301 (COL11A1)
Heparan sulfate/heparin binding proteins [BR:hsa00536]
 Extracellular matrix molecules (General comment) Storage depot, cell adhesion and motility, ECM/barrier formation
  1301 (COL11A1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
OMIM: 
HGNC: 
HPRD: 
Ensembl: 
Vega: 
UniProt: 
Position
1p21
AA seq 1767 aa AA seqDB search
MEPWSSRWKTKRWLWDFTVTTLALTFLFQAREVRGAAPVDVLKALDFHNSPEGISKTTGF
CTNRKNSKGSDTAYRVSKQAQLSAPTKQLFPGGTFPEDFSILFTVKPKKGIQSFLLSIYN
EHGIQQIGVEVGRSPVFLFEDHTGKPAPEDYPLFRTVNIADGKWHRVAISVEKKTVTMIV
DCKKKTTKPLDRSERAIVDTNGITVFGTRILDEEVFEGDIQQFLITGDPKAAYDYCEHYS
PDCDSSAPKAAQAQEPQIDEANIVDDFQEYNYGTMESYQTEAPRHVSGTNEPNPVEEIFT
EEYLTGEDYDSQRKNSEDTLYENKEIDGRDSDLLVDGDLGEYDFYEYKEYEDKPTSPPNE
EFGPGVPAETDITETSINGHGAYGEKGQKGEPAVVEPGMLVEGPPGPAGPAGIMGPPGLQ
GPTGPPGDPGDRGPPGRPGLPGADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAI
LQQARIALRGPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKR
GRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEI
GPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQ
GLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYP
GPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRA
GPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPR
GQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPP
GKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLP
GAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSP
GERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPA
GSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMF
GQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQ
GPPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPP
GDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPP
GKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQ
GLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQ
GSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGSPGPP
GEVIQPLPILSSKKTRRHTEGMQADADDNILDYSDGMEEIFGSLNSLKQDIEHMKFPMGT
QTNPARTCKDLQLSHPDFPDGEYWIDPNQGCSGDSFKVYCNFTSGGETCIYPDKKSEGVR
ISSWPKEKPGSWFSEFKRGKLLSYLDVEGNSINMVQMTFLKLLTASARQNFTYHCHQSAA
WYDVSSGSYDKALRFLGSNDEEMSYDNNPFIKTLYDGCASRKGYEKTVIEINTPKIDQVP
IVDVMINDFGDQNQKFGFEVGPVCFLG
NT seq 5304 nt NT seq  +upstreamnt  +downstreamnt
atggagccgtggtcctctaggtggaaaacgaaacggtggctctgggatttcaccgtaaca
accctcgcattgaccttcctcttccaagctagagaggtcagaggagctgctccagttgat
gtactaaaagcactagattttcacaattctccagagggaatatcaaaaacaacgggattt
tgcacaaacagaaagaattctaaaggctcagatactgcttacagagtttcaaagcaagca
caactcagtgccccaacaaaacagttatttccaggtggaactttcccagaagacttttca
atactatttacagtaaaaccaaaaaaaggaattcagtctttccttttatctatatataat
gagcatggtattcagcaaattggtgttgaggttgggagatcacctgtttttctgtttgaa
gaccacactggaaaacctgccccagaagactatcccctcttcagaactgttaacatcgct
gacgggaagtggcatcgggtagcaatcagcgtggagaagaaaactgtgacaatgattgtt
gattgtaagaagaaaaccacgaaaccacttgatagaagtgagagagcaattgttgatacc
aatggaatcacggtttttggaacaaggattttggatgaagaagtttttgagggggacatt
cagcagtttttgatcacaggtgatcccaaggcagcatatgactactgtgagcattatagt
ccagactgtgactcttcagcacccaaggctgctcaagctcaggaacctcagatagatgag
gcaaacatcgttgatgattttcaagaatacaactatggaacaatggaaagttaccagaca
gaagctcctaggcatgtttctgggacaaatgagccaaatccagttgaagaaatatttact
gaagaatatctaacgggagaggattatgattcccagaggaaaaattctgaggatacacta
tatgaaaacaaagaaatagacggcagggattctgatcttctggtagatggagatttaggc
gaatatgatttttatgaatataaagaatatgaagataaaccaacaagcccccctaatgaa
gaatttggtccaggtgtaccagcagaaactgatattacagaaacaagcataaatggccat
ggtgcatatggagagaaaggacagaaaggagaaccagcagtggttgagcctggtatgctt
gtcgaaggaccaccaggaccagcaggacctgcaggtattatgggtcctccaggtctacaa
ggccccactggaccccctggtgaccctggcgataggggccccccaggacgtcctggctta
ccaggggctgatggtctacctggtcctcctggtactatgttgatgttaccgttccgttat
ggtggtgatggttccaaaggaccaaccatctctgctcaggaagctcaggctcaagctatt
cttcagcaggctcggattgctctgagaggcccacctggcccaatgggtctaactggaaga
ccaggtcctgtgggggggcctggttcatctggggccaaaggtgagagtggtgatccaggt
cctcagggccctcgaggcgtccagggtccccctggtccaacgggaaaacctggaaaaagg
ggtcgtccaggtgcagatggaggaagaggaatgccaggagaacctggggcaaagggagat
cgagggtttgatggacttccgggtctgccaggtgacaaaggtcacaggggtgaacgaggt
cctcaaggtcctccaggtcctcctggtgatgatggaatgaggggagaagatggagaaatt
ggaccaagaggtcttccaggtgaagctggcccacgaggtttgctgggtccaaggggaact
ccaggagctccagggcagcctggtatggcaggtgtagatggccccccaggaccaaaaggg
aacatgggtccccaaggggagcctgggcctccaggtcaacaagggaatccaggacctcag
ggtcttcctggtccacaaggtccaattggtcctcctggtgaaaaaggaccacaaggaaaa
ccaggacttgctggacttcctggtgctgatgggcctcctggtcatcctgggaaagaaggc
cagtctggagaaaagggggctctgggtccccctggtccacaaggtcctattggatacccg
ggcccccggggagtaaagggagcagatggtgtcagaggtctcaagggatctaaaggtgaa
aagggtgaagatggttttccaggattcaaaggtgacatgggtctaaaaggtgacagagga
gaagttggtcaaattggcccaagaggggaagatggccctgaaggacccaaaggtcgagca
ggcccaactggagacccaggtccttcaggtcaagcaggagaaaagggaaaacttggagtt
ccaggattaccaggatatccaggaagacaaggtccaaagggttccactggattccctggg
tttccaggtgccaatggagagaaaggtgcacggggagtagctggcaaaccaggccctcgg
ggtcagcgtggtccaacgggtcctcgaggttcaagaggtgcaagaggtcccactgggaaa
cctgggccaaagggcacttcaggtggcgatggccctcctggccctccaggtgaaagaggt
cctcaaggacctcagggtccagttggattccctggaccaaaaggccctcctggaccacct
gggaaggatgggctgccaggacaccctgggcaacgtggggagactggatttcaaggcaag
accggccctcctgggccagggggagtggttggaccacagggaccaaccggtgagactggt
ccaataggggaacgtgggcatcctggccctcctggccctcctggtgagcaaggtcttcct
ggtgctgcaggaaaagaaggtgcaaagggtgatccaggtcctcaaggtatctcagggaaa
gatggaccagcaggattacgtggtttcccaggggaaagaggtcttcctggagctcagggt
gcacctggactgaaaggaggggaaggtccccagggcccaccaggtccagttggctcacca
ggagaacgtgggtcagcaggtacagctggcccaattggtttaccagggcgcccgggacct
cagggtcctcctggtccagctggagagaaaggtgctcctggagaaaaaggtccccaaggg
cctgcagggagagatggagttcaaggtcctgttggtctcccagggccagctggtcctgcc
ggctcccctggggaagacggagacaagggtgaaattggtgagccgggacaaaaaggcagc
aagggtgacaagggagaaaatggccctcccggtcccccaggtcttcaaggaccagttggt
gcccctggaattgctggaggtgatggtgaaccaggtcctagaggacagcaggggatgttt
gggcaaaaaggtgatgagggtgccagaggcttccctggacctcctggtccaataggtctt
cagggtctgccaggcccacctggtgaaaaaggtgaaaatggggatgttggtcccatgggg
ccacctggtcctccaggcccaagaggccctcaaggtcccaatggagctgatggaccacaa
ggacccccagggtctgttggttcagttggtggtgttggagaaaagggtgaacctggagaa
gcagggaacccagggcctcctggggaagcaggtgtaggcggtcccaaaggagaaagagga
gagaaaggggaagctggtccacctggagctgctggacctccaggtgccaaggggccacca
ggtgatgatggccctaagggtaacccgggtcctgttggttttcctggagatcctggtcct
cctggggaacctggccctgcaggtcaagatggtgttggtggtgacaagggtgaagatgga
gatcctggtcaaccgggtcctcctggcccatctggtgaggctggcccaccaggtcctcct
ggaaaacgaggtcctcctggagctgcaggtgcagagggaagacaaggtgaaaaaggtgct
aagggggaagcaggtgcagaaggtcctcctggaaaaaccggcccagtcggtcctcaggga
cctgcaggaaagcctggtccagaaggtcttcggggcatccctggtcctgtgggagaacaa
ggtctccctggagctgcaggccaagatggaccacctggtcctatgggacctcctggctta
cctggtctcaaaggtgaccctggctccaagggtgaaaagggacatcctggtttaattggc
ctgattggtcctccaggagaacaaggggaaaaaggtgaccgagggctccctggaactcaa
ggatctccaggagcaaaaggggatgggggaattcctggtcctgctggtcccttaggtcca
cctggtcctccaggtttaccaggtcctcaaggcccaaagggtaacaaaggctctactgga
cccgctggccagaaaggtgacagtggtcttccagggcctcctgggtctccaggtccacct
ggtgaagtcattcagcctttaccaatcttgtcctccaaaaaaacgagaagacatactgaa
ggcatgcaagcagatgcagatgataatattcttgattactcggatggaatggaagaaata
tttggttccctcaattccctgaaacaagacattgagcatatgaaatttccaatgggtact
cagaccaatccagcccgaacttgtaaagacctgcaactcagccatcctgacttcccagat
ggtgaatattggattgatcctaaccaaggttgctcaggagattccttcaaagtttactgt
aatttcacatctggtggtgagacttgcatttatccagacaaaaaatctgagggagtaaga
atttcatcatggccaaaggagaaaccaggaagttggtttagtgaatttaagaggggaaaa
ctgctttcatacttagatgttgaaggaaattccatcaatatggtgcaaatgacattcctg
aaacttctgactgcctctgctcggcaaaatttcacctaccactgtcatcagtcagcagcc
tggtatgatgtgtcatcaggaagttatgacaaagcacttcgcttcctgggatcaaatgat
gaggagatgtcctatgacaataatccttttatcaaaacactgtatgatggttgtgcgtcc
agaaaaggctatgaaaagactgtcattgaaatcaatacaccaaaaattgatcaagtacct
attgttgatgtcatgatcaatgactttggtgatcagaatcagaagttcggatttgaagtt
ggtcctgtttgttttcttggctaa

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