KEGG T01001: 23460

Homo sapiens (human): 23460

Entry

23460 CDS T01001

Gene name

ABCA6, EST155051

Definition

ATP-binding cassette, sub-family A (ABC1), member 6

Orthology

K05649

ATP-binding cassette, subfamily A (ABC1), member 6

Organism

hsa Homo sapiens (human)

Pathway

hsa02010

ABC transporters

Class

Environmental Information Processing; Membrane transport; ABC transporters [PATH:hsa02010]

SSDB

Motif

Pfam:

ABC_tran ABC2_membrane_3 AAA_21 DUF258 AAA_29 AAA_16 AAA_15 ABC2_membrane_4 MMR_HSR1 AAA_25 Dynamin_N AAA_23

Other DBs

NCBI-GI:

27436953

NCBI-GeneID:

23460

OMIM:

612504

HGNC:

HPRD:

Ensembl:

Vega:

UniProt:

Position

17q24.3

AA seq 1617 aa
MNMKQKSVYQQTKALLCKNFLKKWRMKRESLLEWGLSILLGLCIALFSSSMRNVQFPGMA
PQNLGRVDKFNSSSLMVVYTPISNLTQQIMNKTALAPLLKGTSVIGAPNKTHMDEILLEN
LPYAMGIIFNETFSYKLIFFQGYNSPLWKEDFSAHCWDGYGEFSCTLTKYWNRGFVALQT
AINTAIIEITTNHPVMEELMSVTAITMKTLPFITKNLLHNEMFILFFLLHFSPLVYFISL
NVTKERKKSKNLMKMMGLQDSAFWLSWGLIYAGFIFIISIFVTIIITFTQIIVMTGFMVI
FILFFLYGLSLVALVFLMSVLLKKAVLTNLVVFLLTLFWGCLGFTVFYEQLPSSLEWILN
ICSPFAFTTGMIQIIKLDYNLNGVIFPDPSGDSYTMIATFSMLLLDGLIYLLLALYFDKI
LPYGDERHYSPLFFLNSSSCFQHQRTNAKVIEKEIDAEHPSDDYFEPVAPEFQGKEAIRI
RNVKKEYKGKSGKVEALKGLLFDIYEGQITAILGHSGAGKSSLLNILNGLSVPTEGSVTI
YNKNLSEMQDLEEIRKITGVCPQFNVQFDILTVKENLSLFAKIKGIHLKEVEQEVQRILL
ELDMQNIQDNLAKHLSEGQKRKLTFGITILGDPQILLLDEPTTGLDPFSRDQVWSLLRER
RADHVILFSTQSMDEADILADRKVIMSNGRLKCAGSSMFLKRRWGLGYHLSLHRNEICNP
EQITSFITHHIPDAKLKTENKEKLVYTLPLERTNTFPDLFSDLDKCSDQGVTGYDISMST
LNEVFMKLEGQSTIEQDFEQVEMIRDSESLNEMELAHSSFSEMQTAVSDMGLWRMQVFAM
ARLRFLKLKRQTKVLLTLLLVFGIAIFPLIVENIMYAMLNEKIDWEFKNELYFLSPGQLP
QEPRTSLLIINNTESNIEDFIKSLKHQNILLEVDDFENRNGTDGLSYNGAIIVSGKQKDY
RFSVVCNTKRLHCFPILMNIISNGLLQMFNHTQHIRIESSPFPLSHIGLWTGLPDGSFFL
FLVLCSISPYITMGSISDYKKNAKSQLWISGLYTSAYWCGQALVDVSFFILILLLMYLIF
YIENMQYLLITSQIVFALVIVTPGYAASLVFFIYMISFIFRKRRKNSGLWSFYFFFASTI
MFSITLINHFDLSILITTMVLVPSYTLLGFKTFLEVRDQEHYREFPEANFELSATDFLVC
FIPYFQTLLFVFVLRCMELKCGKKRMRKDPVFRISPQSRDAKPNPEEPIDEDEDIQTERI
RTATALTTSILDEKPVIIASCLHKEYAGQKKSCFSKRKKKIAARNISFCVQEGEILGLLG
PNGAGKSSSIRMISGITKPTAGEVELKGCSSVLGHLGYCPQENVLWPMLTLREHLEVYAA
VKGLRKADARLAIARLVSAFKLHEQLNVPVQKLTAGITRKLCFVLSLLGNSPVLLLDEPS
TGIDPTGQQQMWQAIQAVVKNTERGVLLTTHNLAEAEALCDRVAIMVSGRLRCIGSIQHL
KNKLGKDYILELKVKETSQVTLVHTEILKLFPQAAGQERYSSLLTYKLPVADVYPLSQTF
HKLEAVKHNFNLEEYSLSQCTLEKVFLELSKEQEVGNFDEEIDTTMRWKLLPHSDEP

NT seq 4854 nt +upstreamnt +downstreamnt
atgaatatgaaacagaaaagcgtgtatcagcaaaccaaagcacttctgtgcaagaatttt
cttaagaaatggaggatgaaaagagagagcttattggaatggggcctctcaatacttcta
ggactgtgtattgctctgttttccagttccatgagaaatgtccagtttcctggaatggct
cctcagaatctgggaagggtagataaatttaatagctcttctttaatggttgtgtataca
ccaatatctaatttaacccagcagataatgaataaaacagcacttgctcctcttttgaaa
ggaacaagtgtcattggggcaccaaataaaacacacatggacgaaatacttctggaaaat
ttaccatatgctatgggaatcatctttaatgaaactttctcttataagttaatatttttc
cagggatataacagtccactttggaaagaagatttctcagctcattgctgggatggatat
ggtgagttttcatgtacattgaccaaatactggaatagaggatttgtggctttacaaaca
gctattaatactgccattatagaaatcacaaccaatcaccctgtgatggaggagttgatg
tcagttactgctataactatgaagacattacctttcataactaaaaatcttcttcacaat
gagatgtttattttattcttcttgcttcatttctccccacttgtatattttatatcactc
aatgtaacaaaagagagaaaaaagtctaagaatttgatgaaaatgatgggtctccaagat
tcagcattctggctctcctggggtctaatctatgctggcttcatctttattatttccata
ttcgttacaattatcataacattcacccaaattatagtcatgactggcttcatggtcata
tttatactcttttttttatatggcttatctttggtagctttggtgttcctgatgagtgtg
ctgttaaagaaagctgtcctcaccaatttggttgtgtttctccttaccctcttttgggga
tgtctgggattcactgtattttatgaacaacttccttcatctctggagtggattttgaat
atttgtagcccttttgcctttactactggaatgattcagattatcaaactggattataac
ttgaatggtgtaatttttcctgacccttcaggagactcatatacaatgatagcaactttt
tctatgttgcttttggatggtctcatctacttgctattggcattatactttgacaaaatt
ttaccctatggagatgagcgccattattctcctttatttttcttgaattcatcatcttgt
ttccaacaccaaaggactaatgctaaggttattgagaaagaaatcgatgctgagcatccc
tctgatgattattttgaaccagtagctcctgaattccaaggaaaagaagccatcagaatc
agaaatgttaagaaggaatataaaggaaaatctggaaaagtggaagcattgaaaggcttg
ctctttgacatatatgaaggtcaaatcacggcaatcctgggtcacagtggagctggcaaa
tcttcactgctaaatattcttaatggattgtctgttccaacagaaggatcagttaccatc
tataataaaaatctctctgaaatgcaagacttggaggaaatcagaaagataactggcgtc
tgtcctcaattcaatgttcaatttgacatactcaccgtgaaggaaaacctcagcctgttt
gctaaaataaaagggattcatctaaaggaagtggaacaagaggtacaacgaatattattg
gaattggacatgcaaaacattcaagataaccttgctaaacatttaagtgaaggacagaaa
agaaagctgacttttgggattaccattttaggagatcctcaaattttgcttttagatgaa
ccaactactggattggatcccttttccagagatcaagtgtggagcctcctgagagagcgt
agagcagatcatgtgatccttttcagtacccagtccatggatgaggctgacatcctggct
gatagaaaagtgatcatgtccaatgggagactgaagtgtgcaggttcttctatgtttttg
aaaagaaggtggggtcttggatatcacctaagtttacataggaatgaaatatgtaaccca
gaacaaataacatccttcattactcatcacatccccgatgctaaattaaaaacagaaaac
aaagaaaagcttgtatatactttgccactggaaaggacaaatacatttccagatcttttc
agtgatctggataagtgttctgaccagggagtgacaggttatgacatttccatgtcaact
ctaaatgaagtctttatgaaactggaaggacagtcaactatcgaacaagatttcgaacaa
gtggagatgataagagactcagaaagcctcaatgaaatggagctggctcactcttccttc
tctgaaatgcagacagctgtgagtgacatgggcctctggagaatgcaagtctttgccatg
gcacggctccgtttcttaaagttaaaacgtcaaactaaagtgttattgaccctattattg
gtatttggaatcgcaatattccctttgattgttgaaaatataatgtatgctatgttaaat
gaaaagatcgattgggaatttaaaaacgaattgtattttctctctcctggacaacttccc
caggaaccccgtaccagcctgttgatcatcaataacacagaatcaaatattgaagatttt
ataaaatcactgaagcatcaaaatatacttttggaagtagatgactttgaaaacagaaat
ggtactgatggcctctcatacaatggagctatcatagtttctggtaaacaaaaggattat
agattttcagttgtgtgtaataccaagagattgcactgttttccaattcttatgaatatt
atcagcaatgggctacttcaaatgtttaatcacacacaacatattcgaattgagtcaagc
ccatttcctcttagccacataggactctggactgggttgccggatggttcctttttctta
tttttggttctatgtagcatttctccttatatcaccatgggcagcatcagtgattacaag
aaaaatgctaagtcccagctatggatttcaggcctctacacttctgcttactggtgtggg
caggcactagtggacgtcagcttcttcattttaattctccttttaatgtatttaattttc
tacatagaaaacatgcagtaccttcttattacaagccaaattgtgtttgctttggttata
gttactcctggttatgcagcttctcttgtcttcttcatatatatgatatcatttattttt
cgcaaaaggagaaaaaacagtggcctttggtcattttacttcttttttgcctccaccatc
atgttttccatcactttaatcaatcattttgacctaagtatattgattaccaccatggta
ttggttccttcatataccttgcttggatttaaaacttttttggaagtgagagaccaggag
cactacagagaatttccagaggcaaattttgaattgagtgccactgattttctagtctgc
ttcataccctactttcagactttgctattcgtttttgttctaagatgcatggaactaaaa
tgtggaaagaaaagaatgcgaaaagatcctgttttcagaatttccccccaaagtagagat
gctaagccaaatccagaagaacccatagatgaagatgaagatattcaaacagaaagaata
agaacagccactgctctgaccacttcaatcttagatgagaaacctgttataattgccagc
tgtctacacaaagaatatgcaggccagaagaaaagttgcttttcaaagaggaagaagaaa
atagcagcaagaaatatctctttctgtgttcaagaaggtgaaattttgggattgctagga
cccaatggtgctggaaaaagttcatctattagaatgatatctgggatcacaaagccaact
gctggagaggtggaactgaaaggctgcagttcagttttgggccacctggggtactgccct
caagagaacgtgctgtggcccatgctgacgttgagggaacacctggaggtgtatgctgcc
gtcaaggggctcaggaaagcggacgcgaggctcgccatcgcaagattagtgagtgctttc
aaactgcatgagcagctgaatgttcctgtgcagaaattaacagcaggaatcacgagaaag
ttgtgttttgtgctgagcctcctgggaaactcacctgtcttgctcctggatgaaccatct
acgggcatagaccccacagggcagcagcaaatgtggcaggcaatccaggcagtcgttaaa
aacacagagagaggtgtcctcctgaccacccataacctggctgaggcggaagccttgtgt
gaccgtgtggccatcatggtgtctggaaggcttagatgcattggctccatccaacacctg
aaaaacaaacttggcaaggattacattctagagctaaaagtgaaggaaacgtctcaagtg
actttggtccacactgagattctgaagcttttcccacaggctgcagggcaggaaaggtat
tcctctttgttaacctataagctgcccgtggcagacgtttaccctctatcacagaccttt
cacaaattagaagcagtgaagcataactttaacctggaagaatacagcctttctcagtgc
acactggagaaggtattcttagagctttctaaagaacaggaagtaggaaattttgatgaa
gaaattgatacaacaatgagatggaaactcctccctcattcagatgaaccttaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (9)   
   UniGene (1)   
   HGNC (1)   
   HPRD (1)   
   ENSEMBL-HSA (1)   
   OC (1)   
   VEGA (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (24)   
   RefSeq(nuc) (2)   
   GenBank (11)   
   EMBL (11)   
Protein domain (12)   
   Pfam (12)   
All databases (58)   

Download RDF

DBGET integrated database retrieval system