KEGG T01001: 3897

Homo sapiens (human): 3897

Entry

3897 CDS T01001

Gene name

L1CAM, CAML1, CD171, HSAS, HSAS1, MASA, MIC5, N-CAM-L1, N-CAML1, NCAM-L1, S10, SPG1

Definition

L1 cell adhesion molecule

Orthology

K06550

L1 cell adhesion molecule

Organism

hsa Homo sapiens (human)

Pathway

hsa04360	Axon guidance
hsa04514	Cell adhesion molecules (CAMs)

Disease

H00266	Hereditary spastic paraplegia (SPG)
H00577	Syndromic X-linked mental retardation with epilepsy or seizures
H01034	L1 syndrome

Class

Environmental Information Processing; Signaling molecules and interaction; Cell adhesion molecules (CAMs) [PATH:hsa04514]
Organismal Systems; Development; Axon guidance [PATH:hsa04360]

SSDB

Motif

Pfam:

I-set fn3 Ig_2 Ig_3 Bravo_FIGEY ig V-set C2-set_2 BiPBP_C

Other DBs

NCBI-GI:

NCBI-GeneID:

OMIM:

HGNC:

HPRD:

Ensembl:

Vega:

UniProt:

Position

Xq28

AA seq 1257 aa
MVVALRYVWPLLLCSPCLLIQIPEEYEGHHVMEPPVITEQSPRRLVVFPTDDISLKCEAS
GKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSFTITGNNSNFAQRFQGIYRCFASNKL
GTAMSHEIRLMAEGAPKWPKETVKPVEVEEGESVVLPCNPPPSAEPLRIYWMNSKILHIK
QDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPIDLRVKATNSMIDRKP
RLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLRPSGPMPADRVTYQNHNKTLQLL
KVGEEDDGEYRCLAENSLGSARHAYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRP
QPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHGLLLANAYIY
VVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANG
TLGIRDLQANDTGRYFCLAANDQNNVTIMANLKVKDATQITQGPRSTIEKKGSRVTFTCQ
ASFDPSLQPSITWRGDGRDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVV
ESRAQLLVVGSPGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPE
KWYSLGKVPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVD
VKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQIVSDPFLVVSNTST
FVPYEIKVQAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQ
VKGHLRGYNVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNG
RGSGPASEFTFSTPEGVPGHPEALHLECQSNTSLLLRWQPPLSHNGVLTGYVLSYHPLDE
GGKGQLSFNLRDPELRTHNLTDLSPHLRYRFQLQATTKEGPGEAIVREGGTMALSGISDF
GNISATAGENYSVVSWVPKEGQCNFRFHILFKALGEEKGGASLSPQYVSYNQSSYTQWDL
QPDTDYEIHLFKERMFRHQMAVKTNGTGRVRLPPAGFATEGWFIGFVSAIILLLLVLLIL
CFIKRSKGGKYSVKDKEDTQVDSEARPMKDETFGEYRSLESDNEEKAFGSSQPSLNGDIK
PLGSDDSLADYGGSVDVQFNEDGSFIGQYSGKKEKEAAGGNDSSGATSPINPAVALE

NT seq 3774 nt +upstreamnt +downstreamnt
atggtcgtggcgctgcggtacgtgtggcctctcctcctctgcagcccctgcctgcttatc
cagatccccgaggaatatgaaggacaccatgtgatggagccacctgtcatcacggaacag
tctccacggcgcctggttgtcttccccacagatgacatcagcctcaagtgtgaggccagt
ggcaagcccgaagtgcagttccgctggacgagggatggtgtccacttcaaacccaaggaa
gagctgggtgtgaccgtgtaccagtcgccccactctggctccttcaccatcacgggcaac
aacagcaactttgctcagaggttccagggcatctaccgctgctttgccagcaataagctg
ggcaccgccatgtcccatgagatccggctcatggccgagggtgcccccaagtggccaaag
gagacagtgaagcccgtggaggtggaggaaggggagtcagtggttctgccttgcaaccct
cccccaagtgcagagcctctccggatctactggatgaacagcaagatcttgcacatcaag
caggacgagcgggtgacgatgggccagaacggcaacctctactttgccaatgtgctcacc
tccgacaaccactcagactacatctgccacgcccacttcccaggcaccaggaccatcatt
cagaaggaacccattgacctccgggtcaaggccaccaacagcatgattgacaggaagccg
cgcctgctcttccccaccaactccagcagccacctggtggccttgcaggggcagccattg
gtcctggagtgcatcgccgagggctttcccacgcccaccatcaaatggctgcgccccagt
ggccccatgccagccgaccgtgtcacctaccagaaccacaacaagaccctgcagctgctg
aaagtgggcgaggaggatgatggcgagtaccgctgcctggccgagaactcactgggcagt
gcccggcatgcgtactatgtcaccgtggaggctgccccgtactggctgcacaagccccag
agccatctatatgggccaggagagactgcccgcctggactgccaagtccagggcaggccc
caaccagaggtcacctggagaatcaacgggatccctgtggaggagctggccaaagaccag
aagtaccggattcagcgtggcgccctgatcctgagcaacgtgcagcccagtgacacaatg
gtgacccaatgtgaggcccgcaaccggcacgggctcttgctggccaatgcctacatctac
gttgtccagctgccagccaagatcctgactgcggacaatcagacgtacatggctgtccag
ggcagcactgcctaccttctgtgcaaggccttcggagcgcctgtgcccagtgttcagtgg
ctggacgaggatgggacaacagtgcttcaggacgaacgcttcttcccctatgccaatggg
accctgggcattcgagacctccaggccaatgacaccggacgctacttctgcctggctgcc
aatgaccaaaacaatgttaccatcatggctaacctgaaggttaaagatgcaactcagatc
actcaggggccccgcagcacaatcgagaagaaaggttccagggtgaccttcacgtgccag
gcctcctttgacccctccttgcagcccagcatcacctggcgtggggacggtcgagacctc
caggagcttggggacagtgacaagtacttcatagaggatgggcgcctggtcatccacagc
ctggactacagcgaccagggcaactacagctgcgtggccagtaccgaactggatgtggtg
gagagtagggcacagctcttggtggtggggagccctgggccggtgccacggctggtgctg
tccgacctgcacctgctgacgcagagccaggtgcgcgtgtcctggagtcctgcagaagac
cacaatgcccccattgagaaatatgacattgaatttgaggacaaggaaatggcgcctgaa
aaatggtacagtctgggcaaggttccagggaaccagacctctaccaccctcaagctgtcg
ccctatgtccactacacctttagggttactgccataaacaaatatggccccggggagccc
agcccggtctctgagactgtggtcacacctgaggcagccccagagaagaaccctgtggat
gtgaagggggaaggaaatgagaccaccaatatggtcatcacgtggaagccgctccggtgg
atggactggaacgccccccaggttcagtaccgcgtgcagtggcgccctcaggggacacga
gggccctggcaggagcagattgtcagcgaccccttcctggtggtgtccaacacgtccacc
ttcgtgccctatgagatcaaagtccaggccgtcaacagccagggcaagggaccagagccc
caggtcactatcggctactctggagaggactacccccaggcaatccctgagctggaaggc
attgaaatcctcaactcaagtgccgtgctggtcaagtggcggccggtggacctggcccag
gtcaagggccacctccgcggatacaatgtgacgtactggagggagggcagtcagaggaag
cacagcaagagacatatccacaaagaccatgtggtggtgcccgccaacaccaccagtgtc
atcctcagtggcttgcggccctatagctcctaccacctggaggtgcaggcctttaacggg
cgaggatcggggcccgccagcgagttcaccttcagcaccccagagggagtgcctggccac
cccgaggcgttgcacctggagtgccagtcgaacaccagcctgctgctgcgctggcagccc
ccactcagccacaacggcgtgctcaccggctacgtgctctcctaccaccccctggatgag
gggggcaaggggcaactgtccttcaaccttcgggaccccgaacttcggacacacaacctg
accgatctcagcccccacctgcggtaccgcttccagcttcaggccaccaccaaagagggc
cctggtgaagccatcgtacgggaaggaggcactatggccttgtctgggatctcagatttt
ggcaacatctcagccacagcgggtgaaaactacagtgtcgtctcctgggtccccaaggag
ggccagtgcaacttcaggttccatatcttgttcaaagccttgggagaagagaagggtggg
gcttccctttcgccacagtatgtcagctacaaccagagctcctacacgcagtgggacctg
cagcctgacactgactacgagatccacttgtttaaggagaggatgttccggcaccaaatg
gctgtgaagaccaatggcacaggccgcgtgaggctccctcctgctggcttcgccactgag
ggctggttcatcggctttgtgagtgccatcatcctcctgctcctcgtcctgctcatcctc
tgcttcatcaagcgcagcaagggcggcaaatactcagtgaaggataaggaggacacccag
gtggactctgaggcccgaccgatgaaagatgagaccttcggcgagtacaggtccctggag
agtgacaacgaggagaaggcctttggcagcagccagccatcgctcaacggggacatcaag
cccctgggcagtgacgacagcctggccgattatgggggcagcgtggatgttcagttcaac
gaggatggttcgttcattggccagtacagtggcaagaaggagaaggaggcggcagggggc
aatgacagctcaggggccacttcccccatcaaccctgccgtggccctagaatag

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Disease (8)   
   KEGG DISEASE (3)   
   OMIM (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (12)   
   UniGene (1)   
   HGNC (1)   
   HPRD (1)   
   ENSEMBL-HSA (1)   
   OC (1)   
   VEGA (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (34)   
   RefSeq(nuc) (4)   
   GenBank (15)   
   EMBL (15)   
Protein domain (9)   
   Pfam (9)   
All databases (81)   

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