KEGG T01001: 4927

Homo sapiens (human): 4927

Entry

4927 CDS T01001

Gene name

NUP88

Definition

nucleoporin 88kDa

Orthology

K14318

nuclear pore complex protein Nup88

Organism

hsa Homo sapiens (human)

Pathway

hsa03013

RNA transport

Module

hsa_M00427

Nuclear pore complex

Class

Genetic Information Processing; Translation; RNA transport [PATH:hsa03013]

SSDB

Motif

Pfam:

Nup88 PqqD

Other DBs

NCBI-GI:

NCBI-GeneID:

OMIM:

HGNC:

HPRD:

Ensembl:

Vega:

UniProt:

Position

17p13.2

AA seq 741 aa
MAAAEGPVGDGELWQTWLPNHVVFLRLREGLKNQSPTEAEKPASSSLPSSPPPQLLTRNV
VFGLGGELFLWDGEDSSFLVVRLRGPSGGGEEPALSQYQRLLCINPPLFEIYQVLLSPTQ
HHVALIGIKGLMVLELPKRWGKNSEFEGGKSTVNCSTTPVAERFFTSSTSLTLKHAAWYP
SEILDPHVVLLTSDNVIRIYSLREPQTPTNVIILSEAEEESLVLNKGRAYTASLGETAVA
FDFGPLAAVPKTLFGQNGKDEVVAYPLYILYENGETFLTYISLLHSPGNIGKLLGPLPMH
PAAEDNYGYDACAVLCLPCVPNILVIATESGMLYHCVVLEGEEEDDHTSEKSWDSRIDLI
PSLYVFECVELELALKLASGEDDPFDSDFSCPVKLHRDPKCPSRYHCTHEAGVHSVGLTW
IHKLHKFLGSDEEDKDSLQELSTEQKCFVEHILCTKPLPCRQPAPIRGFWIVPDILGPTM
ICITSTYECLIWPLLSTVHPASPPLLCTREDVEVAESPLRVLAETPDSFEKHIRSILQRS
VANPAFLKASEKDIAPPPEECLQLLSRATQVFREQYILKQDLAKEEIQRRVKLLCDQKKK
QLEDLSYCREERKSLREMAERLADKYEEAKEKQEDIMNRMKKLLHSFHSELPVLSDSERD
MKKELQLIPDQLRHLGNAIKQVTMKKDYQQQKMEKVLSLPKPTIILSAYQRKCIQSILKE
EGEHIREMVKQINDIRNHVNF

NT seq 2226 nt +upstreamnt +downstreamnt
atggcggccgccgagggaccggtgggcgacggcgagctgtggcagacctggcttcctaac
cacgtcgtgttcttgcggctccgggagggactgaaaaaccagagtccaaccgaagctgag
aaaccagcttcttcgtcgttgccttcgtcgccgccgccgcagttgctgacgagaaacgtg
gtctttggcctcggcggagagcttttcctgtgggacggagaagacagctccttcttagtc
gttcgccttcggggccccagcggcggcggcgaagagcccgccctgtcccagtaccagaga
ttgctttgcataaatccacccctgtttgaaatctatcaagtcttgttaagcccaacacaa
catcatgtagcacttataggaataaaaggacttatggtattagaattacctaaaagatgg
gggaagaattctgaatttgaaggtggaaaatcaacagtgaattgtagtaccactccagtt
gcggagagatttttcaccagttccacctctctgactctaaagcatgctgcatggtatcca
agtgaaatcctggatccccacgtagtgctgttaacatcagacaacgtaatcagaatttac
tcactacgtgagccgcagacacccactaacgtgataatactttcagaagccgaagaggaa
agtctagtactcaataaaggaagggcgtataccgcatctctaggagagacagcagttgca
tttgactttgggccattggcagcagtcccaaagactctatttggacaaaacggcaaagat
gaagtagtggcatacccactgtacatcttatatgaaaatggagagactttcctgacatac
atcagtctgttacacagccctggaaatattggaaagctgttgggtccattgcccatgcat
cctgcggctgaagataactatggttatgatgcgtgtgctgtactctgcttaccctgtgtc
cccaatatcttagtgatcgctactgaatcaggaatgctgtatcactgtgtcgtgctagaa
ggggaagaagaagatgaccacacgtcagaaaagtcctgggattccaggattgacctcatt
ccttctctgtatgtgtttgaatgtgttgagttggagcttgctttgaaactggcatctgga
gaggatgacccttttgattctgacttttcttgtccagtcaaacttcatagagatcccaag
tgtccttcaagatatcactgtactcatgaagctggtgtacatagtgttgggctaacttgg
attcataaacttcacaaatttcttggatcagatgaagaagataaggatagtttacaggaa
ctctctacagaacagaaatgctttgttgaacacatcctttgtacgaagccattgccctgc
aggcagccagctccaattcgaggattttggattgtacctgacattctgggacccacgatg
atctgcatcaccagtacctatgaatgcctcatatggccgttattaagtacagtccatcca
gcgtctcctcccctgctttgtactcgagaagatgttgaagtggcagagtctcccctccgt
gttctggctgaaaccccagattcctttgaaaagcatattagaagcattttgcaacgtagt
gttgccaatccagcatttttgaaagcttctgaaaaggacatagcccctcctcctgaagaa
tgccttcagctcctcagcagagccacccaggtgttcagagagcagtacattctcaaacag
gacttggcaaaggaggagattcagcggagggtcaaattattatgtgaccaaaaaaagaaa
caactagaagatctcagttattgtcgagaagagaggaaaagtctgcgggaaatggctgag
cgtttagctgacaaatatgaggaagctaaagaaaaacaagaggatatcatgaacaggatg
aaaaaactacttcacagttttcactctgagctcccagttctctctgatagtgagcgagac
atgaagaaagaattacagctgatacctgatcaacttcgacatttgggcaatgccatcaaa
caggttactatgaaaaaggattatcaacagcaaaagatggagaaggtgttgagtcttcca
aaacccaccattattctcagtgcctaccagcgaaagtgcattcagtccatcctgaaagag
gagggtgaacatataagggaaatggtgaagcaaatcaatgatatccgcaatcatgtaaac
ttctga

All links

Pathway (2)   
   KEGG PATHWAY (1)   
   KEGG MODULE (1)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (5)   
   UniGene (1)   
   HGNC (1)   
   HPRD (1)   
   ENSEMBL-HSA (1)   
   OC (1)   
   VEGA (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (19)   
   RefSeq(nuc) (1)   
   GenBank (9)   
   EMBL (9)   
Protein domain (2)   
   Pfam (2)   
All databases (40)   

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