KEGG T01001: 51340

Homo sapiens (human): 51340

Entry

51340 CDS T01001

Gene name

CRNKL1, CLF, CRN, Clf1, HCRN, MSTP021, SYF3

Definition

crooked neck pre-mRNA splicing factor-like 1 (Drosophila)

Orthology

K12869

crooked neck

Organism

hsa Homo sapiens (human)

Pathway

hsa03040

Spliceosome

Module

hsa_M00355

Spliceosome, 35S U5-snRNP

Class

Genetic Information Processing; Transcription; Spliceosome [PATH:hsa03040]

SSDB

Motif

Pfam:

HAT TPR_16 Suf TPR_19 TPR_17 NRDE-2 U3_assoc_6 Mad3_BUB1_I

Other DBs

NCBI-GI:

NCBI-GeneID:

OMIM:

HGNC:

HPRD:

Ensembl:

Vega:

UniProt:

Position

20p11.2

AA seq 848 aa
MTATVENLTFQKDTLGNAVDKNTSRLELRSYSLAGRHGSTEPLVLAWSSQFRRLTWGCAL
DALHRSPCVAASQHGVTHLIRSSRTPHSTRCRKEDAQPGHHGNGAASVTAQARGQRSVLQ
VPLPVPRSCLFSESFVVSVSSQSRFLASVPGTGVQRSTAADMAASTAAGKQRIPKVAKVK
NKAPAEVQITAEQLLREAKERELELLPPPPQQKITDEEELNDYKLRKRKTFEDNIRKNRT
VISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWD
RAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPEEQAWHSYINFELRYKEVD
RARTIYERFVLVHPDVKNWIKYARFEEKHAYFAHARKVYERAVEFFGDEHMDEHLYVAFA
KFEENQKEFERVRVIYKYALDRISKQDAQELFKNYTIFEKKFGDRRGIEDIIVSKRRFQY
EEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINY
ALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSI
GKCPKNKLFKVYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGDIDRAR
AIYELAISQPRLDMPEVLWKSYIDFEIEQEETERTRNLYRRLLQRTQHVKVWISFAQFEL
SSGKEGSLTKCRQIYEEANKTMRNCEEKEERLMLLESWRSFEEEFGTASDKERVDKLMPE
KVKKRRKVQTDDGSDAGWEEYFDYIFPEDAANQPNLKLLAMAKLWKKQQQEKEDAEHHPD
EDVDESES

NT seq 2547 nt +upstreamnt +downstreamnt
atgacggcaacagtggagaacctaacgttccagaaggacactttgggaaatgctgttgac
aaaaacacatccagattggagctccgttcttactcccttgcagggcgccacggctcgaca
gagccactcgtcctcgcctggtcatcccagttccggaggctgacctggggatgcgccctg
gacgccctgcaccgcagtccttgcgtcgctgctagtcagcacggcgttacccacctcatc
cgcagctccaggacgccgcactccacgcgctgccgcaaggaggacgcgcagcctggtcac
catggaaacggtgccgcctccgtcacggctcaagcgagaggtcaaaggtcagtcctgcaa
gttccgcttccggttccgagatcctgtttgttttctgaaagctttgtggtttcggtgagc
tctcagagccgatttctagcgtccgtgccggggacaggtgtccagaggtcgactgctgca
gacatggcggcctccaccgcggccgggaagcagcggattcccaaagtggccaaggtgaaa
aacaaagccccggctgaggtacagataactgctgaacaactcttaagagaggctaaagaa
agagaacttgagcttcttccacctccacctcaacagaagatcacagatgaagaagaatta
aatgattataaactaaggaaaaggaagacttttgaagataatataagaaaaaacaggact
gtgattagtaactggataaaatacgcacaatgggaagaaagcctaaaggagattcaaagg
gctcgatccatatacgagcgtgctttagatgtagactaccgaaatattacactctggctg
aaatacgcagaaatggaaatgaagaatcgccaagtcaaccatgctcgaaatatctgggac
cgggccataacaacgctgcctcgagttaatcagttctggtacaagtacacgtacatggag
gaaatgttgggaaacgttgccggtgcccggcaggtgtttgagcgctggatggagtggcag
cctgaggagcaagcctggcactcctacatcaactttgagctgagatacaaagaggtggat
cgggcccgcaccatttatgagcgatttgtcctcgtgcaccctgatgttaagaactggatc
aagtatgcccgctttgaagaaaaacatgcttattttgcccatgcacggaaagtgtatgag
agagctgtggaattctttggagatgaacatatggatgagcacctttatgttgcctttgcc
aagtttgaagaaaatcagaaagagtttgaaagggtacgagtgatttacaagtatgccctg
gacagaatttcaaaacaagatgcccaagaactctttaaaaattataccatctttgagaag
aagtttggtgataggcggggtattgaagatatcattgtgagcaaacggagattccagtac
gaagaagaagtgaaggcgaatccacacaattatgatgcatggtttgattacttgcgcttg
gtagaaagtgacgcagaagctgaagccgtgagagaagtctatgaaagggccattgccaat
gtcccacccattcaggagaagaggcactggaagcgctacatttatctttggatcaactat
gcactctatgaagaattggaggcaaaggatcctgagaggacaagacaggtgtatcaagcc
tctttggaactaattcctcacaaaaagttcacatttgccaaaatgtggatactgtatgca
cagtttgaaatacgacagaagaatctgtcattagccagaagagcattgggaacttccata
ggcaaatgtccaaagaacaaattatttaaagtttacatagaattggagctacagcttcga
gaatttgacagatgccggaagctttatgaaaagttcctggaatttggacctgaaaattgt
acctcatggattaaattcgctgaattagagacaatccttggtgatattgacagagcacgg
gcaatctatgaattagccatcagtcagccacgtttagacatgccagaggtgctttggaaa
tcatatattgattttgaaattgagcaggaagaaacagaaagaacacgaaacctttaccgg
cggttgcttcaacggacgcagcatgtcaaggtatggatcagctttgctcagtttgagttg
tcttcaggaaaagaaggaagtttgactaaatgcagacaaatttatgaagaagctaacaaa
accatgcgaaactgtgaagaaaaggaagagagacttatgctgctggaatcttggcgaagt
tttgaagaagaatttggaacagcttcagataaggagagagtagacaaactcatgccagag
aaagtcaagaagagaagaaaggtccagactgatgatgggtctgatgcaggctgggaagaa
tactttgattacatctttccagaagatgctgccaaccaacctaacctcaaactcctggcc
atggccaaactgtggaagaaacagcagcaggaaaaggaggatgctgagcaccatccagat
gaggacgtcgatgagagtgaatcctga

All links

Pathway (2)   
   KEGG PATHWAY (1)   
   KEGG MODULE (1)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (14)   
   UniGene (1)   
   HGNC (1)   
   HPRD (1)   
   ENSEMBL-HSA (1)   
   OC (1)   
   VEGA (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (33)   
   RefSeq(nuc) (1)   
   GenBank (16)   
   EMBL (16)   
Protein domain (8)   
   Pfam (8)   
All databases (69)   

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