KEGG   Homo sapiens (human): 51542
Entry
51542             CDS       T01001                                 
Symbol
VPS54, HCC8, PPP1R164, SLP-8p, VPS54L, WR, hVps54L
Name
(RefSeq) VPS54 subunit of GARP complex
  KO
K17600  vacuolar protein sorting-associated protein 54
Organism
hsa  Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:hsa01009]
    51542 (VPS54)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hsa04131]
    51542 (VPS54)
Protein phosphatases and associated proteins [BR:hsa01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     51542 (VPS54)
Membrane trafficking [BR:hsa04131]
 Endosome - Golgi transport
  Tethering complex
   GARP complex
    51542 (VPS54)
SSDB
Motif
Pfam: Vps54 Vps54_N EXOC6_Sec15_N SBP_bac_6 DCP1
Other DBs
NCBI-GeneID: 51542
NCBI-ProteinID: NP_057600
OMIM: 614633
HGNC: 18652
Ensembl: ENSG00000143952
UniProt: Q9P1Q0
Position
2:complement(63892150..64019428)
AA seq 977 aa
MASSHSSSPVPQGSSSDVFFKIEVDPSKHIRPVPSLPDVCPKEPTGDSHSLYVAPSLVTD
QHRWTVYHSKVNLPAALNDPRLAKRESDFFTKTWGLDFVDTEVIPSFYLPQISKEHFTVY
QQEISQREKIHERCKNICPPKDTFERTLLHTHDKSRTDLEQVPKIFMKPDFALDDSLTFN
SVLPWSHFNTAGGKGNRDAASSKLLQEKLSHYLDIVEVNIAHQISLRSEAFFHAMTSQHE
LQDYLRKTSQAVKMLRDKIAQIDKVMCEGSLHILRLALTRNNCVKVYNKLKLMATVHQTQ
PTVQVLLSTSEFVGALDLIATTQEVLQQELQGIHSFRHLGSQLCELEKLIDKMMIAEFST
YSHSDLNRPLEDDCQVLEEERLISLVFGLLKQRKLNFLEIYGEKMVITAKNIIKQCVINK
VSQTEEIDTDVVVKLADQMRMLNFPQWFDLLKDIFSKFTIFLQRVKATLNIIHSVVLSVL
DKNQRTRELEEISQQKNAAKDNSLDTEVAYLIHEGMFISDAFGEGELTPIAVDTTSQRNA
SPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPGGVDIMVSEDMKLTDSELGKLANNIQ
ELLYSASDICHDRAVKFLMSRAKDGFLEKLNSMEFITLSRLMETFILDTEQICGRKSTSL
LGALQSQAIKFVNRFHEERKTKLSLLLDNERWKQADVPAEFQDLVDSLSDGKIALPEKKS
GATEERKPAEVLIVEGQQYAVVGTVLLLIRIILEYCQCVDNIPSVTTDMLTRLSDLLKYF
NSRSCQLVLGAGALQVVGLKTITTKNLALSSRCLQLIVHYIPVIRAHFEARLPPKQYSML
RHFDHITKDYHDHIAEISAKLVAIMDSLFDKLLSKYEVKAPVPSACFRNICKQMTKMHEA
IFDLLPEEQTQMLFLRINASYKLHLKKQLSHLNVINDGGPQNGLVTADVAFYTGNLQALK
GLKDLDLNMAEIWEQKR
NT seq 2934 nt   +upstreamnt  +downstreamnt
atggcttcaagccacagttcttcaccagtgcctcaaggaagcagcagtgatgttttcttt
aaaatagaggtagatccgtcaaaacacattcgacctgtgccatcactgccagatgtgtgt
cccaaggaacccacaggtgattcacatagtttatatgttgccccatctctagttacagat
caacatagatggactgtatatcattccaaagtaaatctcccagcagcattaaacgatcct
agattagcaaaaagagaatctgacttcttcacaaaaacatggggattggactttgtggac
actgaagtcataccttcattctacctcccacagatcagcaaggaacattttacagtatat
caacaggaaatctctcagagagagaagattcatgagagatgcaagaatatttgtcctcct
aaagataccttcgaaaggactcttttacatactcatgataaatccaggacagatctggag
caagtacctaagatttttatgaaaccagattttgccttggatgattccttaacttttaat
tcagttttaccatggtctcattttaatactgctggtggaaaaggaaatcgtgatgcagct
tcctcaaagttgcttcaagaaaagctgagccattatctggatattgtggaagtaaacatt
gctcaccagatctctctacgttcagaagcattttttcatgcaatgacctctcaacacgag
ttgcaggactacctcaggaaaacttcccaggctgtaaaaatgcttcgagataaaattgca
cagattgataaagtaatgtgtgaaggatcactccacattttaagactggcacttaccaga
aataattgtgttaaagtatacaataagctgaagttaatggccactgtacaccagactcag
cctacagtacaggtgttattatctacttctgaatttgttggagcattggacttaatagca
acaacacaagaggttctacagcaggaacttcagggcattcacagtttccggcatttggga
tcacagctttgtgaattagaaaaactgatagataaaatgatgattgcagaattttctact
tattctcacagtgacttaaatagaccactggaagatgactgtcaagttttagaagaggaa
agactaatatctcttgtatttggacttttaaaacaaagaaagcttaattttttagaaatc
tatggtgaaaaaatggttattacagcaaagaatatcattaaacagtgtgtgattaataaa
gtttcacaaacagaagaaatagacacagatgttgttgtgaagcttgcagatcagatgaga
atgttgaattttccccagtggtttgatctgctcaaggatattttctctaagtttacaatt
ttcctacagagagtgaaggcaacattaaatatcattcacagtgttgttctctcagttctt
gacaaaaaccaaaggactagagaattggaagagatttcacaacagaagaatgctgcaaaa
gataattcactggacacagaggtggcttatttaatccatgaaggcatgtttataagtgat
gcattcggtgagggtgagctaacacctatagcagttgacactacctctcaaagaaatgca
tctccaaatagtgagccctgcagcagtgattctgtatccgagccagaatgtactactgat
tcttcatccagcaaagagcacacatcatcatctgctattccaggaggtgtggatattatg
gtcagtgaagatatgaaattaactgactcagagctaggaaagctggcaaataatatccag
gaattattatatagtgcctcagatatatgccatgatcgagctgtcaaatttctcatgtca
agagcaaaggatggttttcttgagaagctaaattccatggaattcataacactttctaga
ttaatggaaacattcattttagacaccgaacagatctgtggaagaaaaagcacgtcatta
cttggagcacttcagagccaagctattaagtttgtaaataggtttcatgaagagagaaaa
accaagctcagcctcctcttagacaatgagcgctggaagcaagcagatgttcctgcagaa
tttcaggatcttgttgattctctgtcagatgggaagattgctttacctgaaaaaaaatca
ggagccacagaagaaaggaaaccagctgaagttcttattgtcgagggacaacagtatgca
gttgttggaaccgtattgctgttaataagaattatccttgaatattgccagtgtgtggat
aacatcccatctgttactactgacatgcttactcgtctgtcagatttattgaagtacttc
aattcaagaagttgccagttagttcttggagctggtgcactgcaagttgttggactaaaa
acgataactacaaaaaatttggctctttcttcacgatgtttgcagttaattgtgcactac
attcctgtgatccgggctcattttgaagctcgactaccacctaagcaatatagcatgctt
aggcattttgatcatatcactaaggactaccatgatcacatagctgaaatatcagctaag
cttgtagcgataatggatagcttatttgacaagctgttatctaagtatgaagtgaaggct
cctgttccttctgcctgtttcaggaatatttgtaagcaaatgacaaaaatgcacgaagct
atatttgatctccttccagaagaacaaacacagatgttatttttaagaattaatgcaagt
tataaactccacttgaaaaagcagttatctcacttaaatgtgataaatgatggaggacct
caaaatgggttggtcacagcagatgtagctttttacactggaaatcttcaagccttaaaa
ggccttaaagatttggacctaaatatggccgaaatttgggagcagaagaggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (15)   
   OC (1)   
Protein sequence (17)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (15)   
DNA sequence (47)   
   RefSeq(nuc) (17)   
   GenBank (15)   
   EMBL (15)   
Protein domain (5)   
   Pfam (5)   
All databases (97)   

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