KEGG T01001: 53981

Homo sapiens (human): 53981

Entry

53981 CDS T01001

Gene name

CPSF2, CPSF100

Definition

cleavage and polyadenylation specific factor 2, 100kDa

Orthology

K14402

cleavage and polyadenylation specificity factor subunit 2

Organism

hsa Homo sapiens (human)

Pathway

hsa03015

mRNA surveillance pathway

Class

Genetic Information Processing; Translation; mRNA surveillance pathway [PATH:hsa03015]

SSDB

Motif

Pfam:

CPSF100_C Beta-Casp RMMBL Lactamase_B

Other DBs

NCBI-GI:

NCBI-GeneID:

OMIM:

HGNC:

HPRD:

Ensembl:

Vega:

UniProt:

Position

14q31.1

AA seq 782 aa
MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFSMDIIDSLRKHVHQIDAVLL
SHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHGLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRTT
PGTLARFLIDNPSEKITEIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSS
DESDIEEDIDQPSAHKTKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKSKLESGLTNGDEPMDQDLSDVPTKCISTTESIEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRAFGGKDIKVYMPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELKDDGEDS
EMQVEAPSDSSVIAQQKAMKSLFGDDEKETGEESEIIPTLEPLPPHEVPGHQSVFMNEPR
LSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYA
IV

NT seq 2349 nt +upstreamnt +downstreamnt
atgacgtctattatcaaattaactaccctttctggggtccaagaagaatctgccctttgc
tatcttctccaagttgatgagtttagatttttattggactgtggctgggatgagcacttt
tctatggatattattgattccctgaggaagcatgttcaccagattgatgcagtgctgttg
tctcaccctgatcctctccaccttggtgccctcccgtatgctgtcggaaagttgggtctg
aactgtgctatctatgcaaccattcctgtttataaaatgggacagatgttcatgtatgat
ctttatcagtctcgacacaatacagaagattttacactctttacattagatgatgtggat
gcagcctttgataaaatacagcagctaaaattctctcagattgtgaatttgaaaggtaaa
ggacatggcctgtctatcacacctctgccagctggtcatatgataggtggaacaatatgg
aaaatagtcaaagatggagaagaagaaattgtttatgcagttgacttcaaccacaagagg
gagatccatttaaatggatgttccctggaaatgctaagcaggccttccctacttatcaca
gattcattcaatgctacatatgtacagcctagaagaaaacagagagatgagcagcttctg
acaaatgtcctggaaacacttcgaggtgatggaaatgtgttaatagcagtggacacagca
ggcagagttttggaacttgctcaacttcttgatcagatttggaggactaaagatgcagga
ttgggtgtttactcattggcactcctaaataatgtcagttacaatgtggtggagttttct
aagtcccaggtagaatggatgagtgataaattgatgagatgttttgaagacaaaagaaat
aatccgtttcagtttcgccatctctctttatgtcatggtctttctgacttggcccgtgta
cctagccctaaagttgtacttgccagccaacctgacctggaatgcggattttcaagggat
ctctttattcagtggtgtcaggaccctaaaaactcaatcattctaacctacagaactact
cctgggactttagcacgtttcctaattgataatccttctgaaaaaattacagaaatagag
ttgaggaaacgtgtgaagcttgaagggaaagaacttgaagaatacttggaaaaagagaaa
ctaaagaaagaagctgccaaaaagcttgagcagtcaaaagaggcagatatagattccagt
gatgagagtgatattgaggaagatattgaccagccatcagctcataagacgaagcatgac
ttgatgatgaaaggtgaaggcagtcgtaaaggaagttttttcaaacaggcaaaaaagtcc
tatcctatgtttcctgccccagaagaaagaattaaatgggatgaatatggagagattatc
aaaccagaggatttcttagtgccagagcttcaagctactgaagaagaaaaaagcaaatta
gaatctggtttgacaaatggagatgaacctatggatcaggatttatctgatgttcctact
aaatgtatttctacaacagagtctattgaaataaaagcccgggttacctacatagactat
gaaggacgctctgatggggattccattaaaaaaatcattaatcagatgaaaccacgacag
ttgatcatcgtccatggcccaccagaggccagtcaagatctggcagagtgctgtcgcgcc
tttggtgggaaagatattaaagtgtacatgccaaagctacatgaaacagttgatgccact
agtgaaactcacatctaccaggtgaggttaaaagactcacttgtcagctctcttcagttt
tgtaaggcaaaagatgctgaattagcttggatagatggtgtcttagatatgagagtttcc
aaagtggacacaggggttattttagaagaaggagaactaaaggatgatggagaagactca
gagatgcaagtggaagctccctcagattctagcgttatagcacaacaaaaggccatgaaa
agtctgttcggagatgatgaaaaagaaacaggtgaagaaagtgagatcattcctactttg
gaacccttgccacctcatgaggttcctggacatcagtcagtttttatgaatgaaccaagg
ctgtcagacttcaagcaagttctcttacgggaggggattcaagctgaatttgtaggaggt
gtacttgtttgcaacaatcaagtagcagtccgcagaacggaaactggacgcattggatta
gaaggctgcctttgtcaagatttttataggataagagaccttttatatgaacaatatgcc
attgtataa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (7)   
   UniGene (2)   
   HGNC (1)   
   HPRD (1)   
   ENSEMBL-HSA (1)   
   OC (1)   
   VEGA (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (21)   
   RefSeq(nuc) (1)   
   GenBank (10)   
   EMBL (10)   
Protein domain (4)   
   Pfam (4)   
All databases (46)   

Download RDF

DBGET integrated database retrieval system