KEGG   Homo sapiens (human): 55660Help
Entry
55660             CDS       T01001                                 

Gene name
PRPF40A, FBP-11, FBP11, FLAF1, FNBP3, HIP-10, HIP10, HYPA, NY-REN-6, Prp40
Definition
(RefSeq) pre-mRNA processing factor 40 homolog A
  KO
K12821  
pre-mRNA-processing factor 40
Organism
hsa  Homo sapiens (human)
Pathway
Spliceosome
Brite
KEGG Orthology (KO) [BR:hsa00001]
 Genetic Information Processing
  Transcription
   03040 Spliceosome
    55660 (PRPF40A)
Spliceosome [BR:hsa03041]
 Complex A
  U1 snRNP components
   U1 related factors
    55660 (PRPF40A)
 Complex B
    55660 (PRPF40A)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-ProteinID: 
NCBI-GeneID: 
OMIM: 
HGNC: 
Ensembl: 
Vega: 
Pharos: 
O75400(Tbio)
UniProt: 
Structure
PDB: 

Jmol
Position
2q23.3
AA seq 930 aa AA seqDB search
MCSGSGRRRSSLSPTMRPGTGAERGGLMMGHPGMHYAPMGMHPMGQRANMPPVPHGMMPQ
MMPPMGGPPMGQMPGMMSSVMPGMMMSHMSQASMQPALPPGVNSMDVAAGTASGAKSMWT
EHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTKES
RWAKPKELEDLEGYQNTIVAGSLITKSNLHAMIKAEESSKQEECTTTSTAPVPTTEIPTT
MSTMAAAEAAAAVVAAAAAAAAAAAAANANASTSASNTVSGTVPVVPEPEVTSIVATVVD
NENTVTISTEEQAQLTSTPAIQDQSVEVSSNTGEETSKQETVADFTPKKEEEESQPAKKT
YTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQ
TEKEEKEEARSKYKEAKESFQRFLENHEKMTSTTRYKKAEQMFGEMEVWNAISERDRLEI
YEDVLFFLSKKEKEQAKQLRKRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTFAEDE
ELQNMDKEDALICFEEHIRALEKEEEEEKQKSLLRERRRQRKNRESFQIFLDELHEHGQL
HSMSSWMELYPTISSDIRFTNMLGQPGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKG
FVVEVNTTFEDFVAIISSTKRSTTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKE
SAFKSMLKQAAPPIELDAVWEDIRERFVKEPAFEDITLESERKRIFKDFMHVLEHECQHH
HSKNKKHSKKSKKHHRKRSRSRSGSDSDDDDSHSKKKRQRSESRSASEHSSSAESERSYK
KSKKHKKKSKKRRHKSDSPESDAEREKDKKEKDRESEKDRTRQRSESKHKSPKKKTGKDS
GNWDTSGSELSEGELEKRRRTLLEQLDDDQ
NT seq 2793 nt NT seq  +upstreamnt  +downstreamnt
atgtgtagcggcagtggccgccggcggagcagtctgagcccgacgatgaggccggggacg
ggagctgagcgtggaggcctcatgatggggcaccctggcatgcattatgccccaatggga
atgcaccctatgggtcagagagcgaatatgcctcctgtacctcatggaatgatgccgcag
atgatgccccctatgggagggccaccaatgggacaaatgcctggaatgatgtcgtcagta
atgcctggaatgatgatgtctcatatgtctcaggcttccatgcagcctgccttaccgcca
ggagtaaatagtatggatgtagcagcaggtacagcatctggtgcaaaatcaatgtggact
gaacataaatcacctgatggaaggacttactactacaacactgaaaccaaacagtctacc
tgggagaaaccagatgatcttaaaacacctgctgagcaactcttatctaaatgcccctgg
aaggaatacaaatcagattctggaaagccttactattataattctcaaacaaaagaatct
cgctgggccaaacctaaagaacttgaggatcttgaaggataccagaataccattgttgct
ggaagtcttattacaaaatcaaacctgcatgcaatgatcaaagctgaagaaagcagtaag
caagaagagtgcaccacaacatcaacagccccagtccctacaacagaaattccgaccaca
atgagcaccatggctgctgccgaagcagcagctgctgttgttgcagcagcagcagcggca
gcagcagcagcagctgcagccaatgctaatgcttccacttctgcttctaatactgtcagt
ggaactgttccagttgttcctgagcctgaagttacttccattgttgctactgttgtagat
aatgagaatacagtaactatttcaactgaggaacaagcacaacttactagtacccctgct
attcaggatcaaagtgtggaagtatccagtaatactggagaagaaacatctaagcaagaa
actgtagctgattttactcccaaaaaagaagaggaggagagccaaccagcaaagaaaaca
tacacttggaatacaaaggaagaggcaaagcaagcttttaaagaattattgaaagaaaag
cgggtaccatcgaatgcttcatgggagcaggctatgaaaatgattattaatgatccacga
tacagtgctttggcaaagttaagtgaaaaaaagcaagcctttaatgcctataaagtccag
acagaaaaagaagaaaaagaagaagcaagatcaaagtacaaagaggctaaggaatccttt
cagcgttttcttgaaaatcatgagaaaatgacttctacaaccagatacaaaaaagcagag
caaatgtttggagagatggaagtttggaatgcaatatcagaacgtgatcgtcttgaaatc
tatgaagatgttttgttctttctttcaaaaaaagaaaaggaacaagcaaagcagttgcga
aagagaaattgggaagccttaaaaaacatacttgacaacatggctaatgtaacatactct
accacttggtctgaagcccagcagtatctgatggataatccaacttttgcagaagatgag
gagttacaaaatatggacaaagaagatgcattaatttgctttgaagaacacattcgggct
ttagaaaaggaggaagaagaagaaaaacagaagagtttgctgagagaaaggagacgacag
cgaaaaaatagggaatctttccagatatttttagatgaattacatgaacatggacaactg
cattctatgtcatcttggatggaattgtatccaactattagttctgatattagattcact
aatatgcttggtcagcctggatcaactgcacttgatcttttcaagttttatgttgaggat
cttaaagcacgttatcatgacgagaagaagataataaaagacattctaaaggataaagga
tttgtagttgaagtaaacactacttttgaagattttgtggcgataatcagttcaactaaa
agatcaactacattagatgctggaaatatcaaattggctttcaatagtttactagaaaag
gcagaagcccgtgaacgtgaaagagaaaaagaagaggctcggaagatgaaacgaaaagaa
tctgcatttaagagtatgttaaaacaagctgctcctccgatagaattggatgctgtctgg
gaagatatccgtgagagatttgtaaaagagccagcatttgaggacataactctagaatct
gaaagaaaacgaatatttaaagattttatgcatgtgcttgagcatgaatgtcagcatcat
cattcaaagaacaagaaacattctaagaaatctaaaaaacatcataggaaacgttcccgc
tctcgatcggggtcagattcagatgatgatgatagccattcaaagaaaaaaagacagcga
tcagagtctcgttctgcttcagaacattcttctagtgcagagtctgagagaagttataaa
aagtcaaaaaagcataagaagaaaagtaagaagaggagacataaatctgactctccagaa
tccgatgctgagcgagagaaggataaaaaagaaaaagatcgggaaagtgaaaaagacaga
actagacaaagatcagaatcaaaacacaaatcgcctaagaaaaagactggaaaggattct
ggtaattgggatacttctggcagcgaactgagtgaaggggaattggaaaagcgcagaaga
acccttttggagcaactggatgatgatcaataa

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