KEGG T01001: 55696

Homo sapiens (human): 55696

Entry

55696 CDS T01001

Gene name

RBM22, Cwc2, ZC3H16, fSAP47

Definition

RNA binding motif protein 22

Orthology

K12872

pre-mRNA-splicing factor RBM22/SLT11

Organism

hsa Homo sapiens (human)

Pathway

hsa03040

Spliceosome

Module

hsa_M00355

Spliceosome, 35S U5-snRNP

Class

Genetic Information Processing; Transcription; Spliceosome [PATH:hsa03040]

SSDB

Motif

Pfam:

RRM_1 RRM_6 RRM_5 Nup35_RRM_2 zf-CCCH RRM_3 FYVE zf-CCCH_2

Other DBs

NCBI-GI:

NCBI-GeneID:

OMIM:

HGNC:

HPRD:

Ensembl:

Vega:

UniProt:

Structure

PDB:

2YTC

Position

5q33.1

AA seq 420 aa
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSFKDDMPKSDVNKEYYTQN
MEREISNSDGTRPVGMLGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLG
DTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNV
KWGRSQAARGKEKEKDGTTDSGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAV
VNIALPPPPGIAPPPPPGFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKHSSP

NT seq 1263 nt +upstreamnt +downstreamnt
atggcgacctctctgggttccaacacctacaacaggcagaactgggaggatgcggacttc
cccattctgtgccagacatgtcttggagaaaacccatatatccgaatgaccaaagaaaag
tatgggaaggaatgcaaaatctgtgccaggccattcacagtgtttcgctggtgccctgga
gtccgcatgcgtttcaagaagactgaagtgtgccaaacctgcagtaaattgaagaatgtc
tgtcagacctgcctcttagacctagagtatggcctgcccatccaggttcgtgacgcagga
ttgtcttttaaagatgacatgccaaagtcagatgtcaacaaagagtactatacacagaat
atggagagagagatttctaactctgatggaacacggccagttggcatgctggggaaagcc
acatctaccagtgacatgctgctcaaactggcccggaccacaccctactacaaaaggaat
cgaccccacatttgctccttctgggtgaaaggagagtgtaagagaggagaggaatgtcca
tacagacatgagaagcctacagatccagatgacccccttgctgatcagaatattaaagac
cgttattacggaatcaatgatcctgtagctgacaagcttctaaagcgggcttcaacaatg
cctcggctggacccaccagaggataaaactatcaccacactatatgttggtggtctaggt
gataccattactgagacagatttaagaaatcatttctaccagttcggagagatccggacg
atcactgttgtgcagagacagcagtgtgctttcatccagtttgccacacggcaggctgca
gaagtggctgctgagaagtcctttaataagttgattgtaaatggccgcagactgaatgtg
aaatggggaagatcccaggcagccagaggaaaagaaaaagagaaagatggaactacagac
tctgggatcaaactagaacctgttccaggattgccaggagctcttcctcctcctcctgca
gcagaagaagaagcctctgccaactacttcaacttgcccccaagtggtcctccagctgtg
gtgaacattgctctgccaccgccccctggcattgctccacccccacccccaggttttggg
ccacacatgttccacccaatgggaccaccccctcctttcatgcgggctccaggaccaatc
cactatccttctcaggaccctcagaggatgggagctcatgctggaaaacacagcagcccc
tag

All links

Pathway (2)   
   KEGG PATHWAY (1)   
   KEGG MODULE (1)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (6)   
   UniGene (1)   
   HGNC (1)   
   HPRD (1)   
   ENSEMBL-HSA (1)   
   OC (1)   
   VEGA (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (17)   
   RefSeq(nuc) (1)   
   GenBank (8)   
   EMBL (8)   
3D Structure (1)   
   PDB (1)   
Protein domain (8)   
   Pfam (8)   
All databases (46)   

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