KEGG   Homo sapiens (human): 57556Help
Entry
57556             CDS       T01001                                 

Gene name
SEMA6A, HT018, SEMA, SEMA6A1, SEMAQ, VIA
Definition
sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
Orthology
K06842  
semaphorin 6
Organism
hsa  Homo sapiens (human)
Pathway
Axon guidance
Class
Organismal Systems; Development; Axon guidance [PATH:hsa04360]
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
OMIM: 
HGNC: 
HPRD: 
Ensembl: 
Vega: 
UniProt: 
Position
5q23.1
AA seq 1030 aa AA seqDB search
MRSEALLLYFTLLHFAGAGFPEDSEPISISHGNYTKQYPVFVGHKPGRNTTQRHRLDIQM
IMIMNGTLYIAARDHIYTVDIDTSHTEEIYCSKKLTWKSRQADVDTCRMKGKHKDECHNF
IKVLLKKNDDALFVCGTNAFNPSCRNYKMDTLEPFGDEFSGMARCPYDAKHANVALFADG
KLYSATVTDFLAIDAVIYRSLGESPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIA
VEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQAVT
DVIRINGRDVVLATFSTPYNSIPGSAVCAYDMLDIASVFTGRFKEQKSPDSTWTPVPDER
VPKPRPGCCAGSSSLERYATSNEFPDDTLNFIKTHPLMDEAVPSIFNRPWFLRTMVRYRL
TKIAVDTAAGPYQNHTVVFLGSEKGIILKFLARIGNSGFLNDSLFLEEMSVYNSEKCSYD
GVEDKRIMGMQLDRASSSLYVAFSTCVIKVPLGRCERHGKCKKTCIASRDPYCGWIKEGG
ACSHLSPNSRLTFEQDIERGNTDGLGDCHNSFVALNGHSSSLLPSTTTSDSTAQEGYESR
GGMLDWKHLLDSPDSTDPLGAVSSHNHQDKKGVIRESYLKGHDQLVPVTLLAIAVILAFV
MGAVFSGITVYCVCDHRRKDVAVVQRKEKELTHSRRGSMSSVTKLSGLFGDTQSKDPKPE
AILTPLMHNGKLATPGNTAKMLIKADQHHLDLTALPTPESTPTLQQKRKPSRGSREWERN
QNLINACTKDMPPMGSPVIPTDLPLRASPSHIPSVVVLPITQQGYQHEYVDQPKMSEVAQ
MALEDQAATLEYKTIKEHLSSKSPNHGVNLVENLDSLPPKVPQREASLGPPGASLSQTGL
SKRLEMHHSSSYGVDYKRSYPTNSLTRSHQATTLKRNNTNSSNSSHLSRNQSFGRGDNPP
PAPQRVDSIQVHSSQPSGQAVTVSRQPSLNAYNSLTRSGLKRTPSLKPDVPPKPSFAPLS
TSMKPNDACT
NT seq 3093 nt NT seq  +upstreamnt  +downstreamnt
atgaggtcagaagccttgctgctatatttcacactgctacactttgctggggctggtttc
ccagaagattctgagccaatcagtatttcgcatggcaactatacaaaacagtatccggtg
tttgtgggccacaagccaggacggaacaccacacagaggcacaggctggacatccagatg
attatgatcatgaacggaaccctctacattgctgctagggaccatatttatactgttgat
atagacacatcacacacggaagaaatttattgtagcaaaaaactgacatggaaatctaga
caggccgatgtagacacatgcagaatgaagggaaaacataaggatgagtgccacaacttt
attaaagttcttctaaagaaaaacgatgatgcattgtttgtctgtggaactaatgccttc
aacccttcctgcagaaactataagatggatacattggaaccattcggggatgaattcagc
ggaatggccagatgcccatatgatgccaaacatgccaacgttgcactgtttgcagatgga
aaactatactcagccacagtgactgacttccttgccattgacgcagtcatttaccggagt
cttggagaaagccctaccctgcggaccgtcaagcacgattcaaaatggttgaaagaacca
tactttgttcaagccgtggattacggagattatatctacttcttcttcagggaaatagca
gtggagtataacaccatgggaaaggtagttttcccaagagtggctcaggtttgtaagaat
gatatgggaggatctcaaagagtcctggagaaacagtggacgtcgttcctgaaggcgcgc
ttgaactgctcagttcctggagactctcatttttatttcaacattctccaggcagttaca
gatgtgattcgtatcaacgggcgtgatgttgtcctggcaacgttttctacaccttataac
agcatccctgggtctgcagtctgtgcctatgacatgcttgacattgccagtgtttttact
gggagattcaaggaacagaagtctcctgattccacctggacaccagttcctgatgaacga
gttcctaagcccaggccaggttgctgtgctggctcatcctccttagaaagatatgcaacc
tccaatgagttccctgatgataccctgaacttcatcaagacgcacccgctcatggatgag
gcagtgccctccatcttcaacaggccatggttcctgagaacaatggtcagataccgcctt
accaaaattgcagtggacacagctgctgggccatatcagaatcacactgtggtttttctg
ggatcagagaagggaatcatcttgaagtttttggccagaataggaaatagtggttttcta
aatgacagccttttcctggaggagatgagtgtttacaactctgaaaaatgcagctatgat
ggagtcgaagacaaaaggatcatgggcatgcagctggacagagcaagcagctctctgtat
gttgcgttctctacctgtgtgataaaggttccccttggccggtgtgaacgacatgggaag
tgtaaaaaaacctgtattgcctccagagacccatattgtggatggataaaggaaggtggt
gcctgcagccatttatcacccaacagcagactgacttttgagcaggacatagagcgtggc
aatacagatggtctgggggactgtcacaattcctttgtggcactgaatgggcattccagt
tccctcttgcccagcacaaccacatcagattcgacggctcaagaggggtatgagtctagg
ggaggaatgctggactggaagcatctgcttgactcacctgacagcacagaccctttgggg
gcagtgtcttcccataatcaccaagacaagaagggagtgattcgggaaagttacctcaaa
ggccacgaccagctggttcccgtcaccctcttggccattgcagtcatcctggctttcgtc
atgggggccgtcttctcgggcatcaccgtctactgcgtctgtgatcatcggcgcaaagac
gtggctgtggtgcagcgcaaggagaaggagctcacccactcgcgccggggctccatgagc
agcgtcaccaagctcagcggcctctttggggacactcaatccaaagacccaaagccggag
gccatcctcacgccactcatgcacaacggcaagctcgccactcccggcaacacggccaag
atgctcattaaagcagaccagcaccacctggacctgacggccctccccaccccagagtca
accccaacgctgcagcagaagcggaagcccagccgcggcagccgcgagtgggagaggaac
cagaacctcatcaatgcctgcacaaaggacatgccccccatgggctcccctgtgattccc
acggacctgcccctgcgggcctcccccagccacatccccagcgtggtggtcctgcccatc
acgcagcagggctaccagcatgagtacgtggaccagcccaaaatgagcgaggtggcccag
atggcgctggaggaccaggccgccacactggagtataagaccatcaaggaacatctcagc
agcaagagtcccaaccatggggtgaaccttgtggagaacctggacagcctgccccccaaa
gttccacagcgggaggcctccctgggtcccccgggagcctccctgtctcagaccggtcta
agcaagcggctggaaatgcaccactcctcttcctacggggttgactataagaggagctac
cccacgaactcgctcacgagaagccaccaggccaccactctcaaaagaaacaacactaac
tcctccaattcctctcacctctccagaaaccagagctttggcaggggagacaacccgccg
cccgccccgcagagggtggactccatccaggtgcacagctcccagccatctggccaggcc
gtgactgtctcgaggcagcccagcctcaacgcctacaactcactgacaaggtcggggctg
aagcgtacgccctcgctaaagccggacgtaccccccaaaccatcctttgctcccctttcc
acatccatgaagcccaatgatgcgtgtacataa

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