KEGG T01001: 6729

Homo sapiens (human): 6729

Entry

6729 CDS T01001

Gene name

SRP54

Definition

signal recognition particle 54kDa

Orthology

K03106

signal recognition particle subunit SRP54

Organism

hsa Homo sapiens (human)

Pathway

hsa03060

Protein export

Class

Genetic Information Processing; Folding, sorting and degradation; Protein export [PATH:hsa03060]

SSDB

Motif

Pfam:

SRP54 SRP_SPB cobW AAA_33 CbiA MobB DUF2209 AAA_31 AAA_17 SRPRB ArgK MMR_HSR1 AAA_10 APS_kinase AAA_30 AAA_22 AAA_19 AAA Zeta_toxin AAA_18 6PF2K AAA_16 ATP_bind_1 VirE Thymidylate_kin ResIII AAA_28 KTI12 Torsin

Other DBs

NCBI-GI:

NCBI-GeneID:

OMIM:

HGNC:

HPRD:

Ensembl:

Vega:

UniProt:

Structure

PDB:

1QB2 1MFQ

Position

14q13.2

AA seq 455 aa
MPPLSMKRSAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGL
QGSGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPV
IIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQAC
EAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQP
FISKLLGMGDIEGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQIL
GMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARG
SGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPR
VLHHMGGMAGLQSMMRQFQQGAAGNMKGMMGFNNM

NT seq 1368 nt +upstreamnt +downstreamnt
atgccaccattatcaatgaagaggtctgctattgatcttgaagagatggcatctggtctt
aacaaaagaaaaatgattcagcatgctgtatttaaagaacttgtgaagcttgtagaccct
ggagttaaggcatggacacccactaaaggaaaacaaaatgtgattatgtttgttggattg
caagggagtggtaaaacaacaacatgttcaaagctagcatattattaccagaggaaaggt
tggaagacctgtttaatatgtgcagacacattcagagcaggggcttttgaccaactaaaa
cagaatgctaccaaagcaagaattccattttatggaagctatacagaaatggatcctgtc
atcattgcttctgaaggagtagagaaatttaaaaatgaaaattttgaaattattattgtt
gatacaagtggccgccacaaacaagaagactctttgtttgaagaaatgcttcaagttgct
aatgctatacaacctgataacattgtttatgtgatggatgcctccattgggcaggcttgt
gaagcccaggctaaggcttttaaagataaagtagatgtagcctcagtaatagtgacaaaa
cttgatggccatgcaaaaggaggtggtgcactcagtgcagtcgctgccacaaaaagtccg
attattttcattggtacaggggaacatatagatgactttgaacctttcaaaacacagcct
tttattagcaaacttcttggtatgggcgacattgaaggactgatagataaagtcaacgag
ttgaagttggatgacaatgaagcacttatagagaagttgaaacatggtcagtttacgttg
cgagacatgtatgagcaatttcaaaatatcatgaaaatgggccccttcagtcagatcttg
gggatgatccctggttttgggacagattttatgagcaaaggaaatgaacaggagtcaatg
gcaaggctaaagaaattaatgacaataatggatagtatgaatgatcaagaactagacagt
acggatggtgccaaagtttttagtaaacaaccaggaagaatccaaagagtagcaagagga
tcgggtgtatcaacaagagatgttcaagaacttttgacacaatataccaagtttgcacag
atggtaaaaaagatgggaggtatcaaaggacttttcaaaggtggcgacatgtctaagaat
gtgagccagtcacagatggcaaaattgaaccaacaaatggccaaaatgatggatcctagg
gttcttcatcacatgggtggtatggcaggacttcagtcaatgatgaggcagtttcaacag
ggtgctgctggcaacatgaaaggcatgatgggattcaataatatgtaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (8)   
   UniGene (1)   
   HGNC (1)   
   HPRD (1)   
   ENSEMBL-HSA (1)   
   OC (1)   
   VEGA (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (18)   
   RefSeq(nuc) (2)   
   GenBank (8)   
   EMBL (8)   
3D Structure (2)   
   PDB (2)   
Protein domain (29)   
   Pfam (29)   
All databases (71)   

Download RDF

DBGET integrated database retrieval system