KEGG T01001: 6875

Homo sapiens (human): 6875

Entry

6875 CDS T01001

Gene name

TAF4B, TAF2C2, TAFII105

Definition

TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa

Orthology

K03129

transcription initiation factor TFIID subunit 4

Organism

hsa Homo sapiens (human)

Pathway

hsa03022	Basal transcription factors
hsa05016	Huntington's disease
hsa05168	Herpes simplex infection

Class

Genetic Information Processing; Transcription; Basal transcription factors [PATH:hsa03022]
Human Diseases; Neurodegenerative diseases; Huntington's disease [PATH:hsa05016]
Human Diseases; Infectious diseases; Herpes simplex infection [PATH:hsa05168]

SSDB

Motif

Pfam:

TAF4 TAFH

Other DBs

NCBI-GI:

NCBI-GeneID:

OMIM:

HGNC:

Ensembl:

Vega:

UniProt:

Position

18q11.2

AA seq 862 aa
MPAGLTEPAGAAPPAAVSASGTVTMAPAGALPVRVESTPVALGAVTKAPVSVCVEPTASQ
PLRSPVGTLVTKVAPVSAPPKVSSGPRLPAPQIVAVKAPNTTTIQFPANLQLPPGTVLIK
SNSGPLMLVSPQQTVTRAETTSNITSRPAVPANPQTVKICTVPNSSSQLIKKVAVTPVKK
LAQIGTTVVTTVPKPSSVQSVAVPTSVVTVTPGKPLNTVTTLKPSSLGASSTPSNEPNLK
AENSAAVQINLSPTMLENVKKCKNFLAMLIKLACSGSQSPEMGQNVKKLVEQLLDAKIEA
EEFTRKLYVELKSSPQPHLVPFLKKSVVALRQLLPNSQSFIQQCVQQTSSDMVIATCTTT
VTTSPVVTTTVSSSQSEKSIIVSGATAPRTVSVQTLNPLAGPVGAKAGVVTLHSVGPTAA
TGGTTAGTGLLQTSKPLVTSVANTVTTVSLQPEKPVVSGTAVTLSLPAVTFGETSGAAIC
LPSVKPVVSSAGTTSDKPVIGTPVQIKLAQPGPVLSQPAGIPQAVQVKQLVVQQPSGGNE
KQVTTISHSSTLTIQKCGQKTMPVNTIIPTSQFPPASILKQITLPGNKILSLQASPTQKN
RIKENVTSCFRDEDDINDVTSMAGVNLNEENACILATNSELVGTLIQSCKDEPFLFIGAL
QKRILDIGKKHDITELNSDAVNLISQATQERLRGLLEKLTAIAQHRMTTYKASENYILCS
DTRSQLKFLEKLDQLEKQRKDLEEREMLLKAAKSRSNKEDPEQLRLKQKAKELQQLELAQ
IQHRDANLTALAAIGPRKKRPLESGIEGLKDNLLASGTSSLTATKQLHRPRITRICLRDL
IFCMEQEREMKYSRALYLALLK

NT seq 2589 nt +upstreamnt +downstreamnt
atgcccgccggcctcaccgaacccgccggcgccgctcccccggctgctgtgagcgcctcg
gggaccgtgaccatggccccggccggggcgctgccggtgcgggtggagagcactccggtg
gccctgggcgccgtgactaaggctcctgtcagcgtctgcgtggagcccacggcgtcccag
cccctgcggtcccccgtggggaccctggtgaccaaagtggctccggtcagcgcccctcct
aaagtcagcagcggccctaggctgcctgctcctcagatagtcgccgtgaaagcccccaac
accacgacaatccagtttcctgctaatttgcagcttcctccaggaaccgttttgattaaa
agtaacagtggtccgttgatgttggtatctcctcagcaaactgtaacaagagccgagacc
acaagtaacataacctcaaggccagcagtaccagcgaatcctcaaacagtcaaaatctgt
acagtgccgaactctagctcacaattaatcaagaaagtggcagtgacacctgttaaaaaa
ttggcacaaataggaactactgtggtaaccactgttccgaagccttcctcagtacaatct
gtggctgtgccaaccagtgtcgtcacagttactcctggaaagccattgaatactgtaact
accctgaagccttcaagtttgggagcatcatccactccttcaaatgagcccaatcttaaa
gcagagaactcagcagctgttcagattaatctttctccgacaatgctagaaaatgtgaag
aaatgcaagaacttccttgcaatgttaataaaactagcatgtagtggatcacagtcccca
gaaatggggcaaaatgtgaagaagctggtggaacaacttttggatgcaaaaatcgaagca
gaagaatttactaggaaactgtatgttgaactcaagtcttcacctcagcctcacctggtt
ccttttcttaagaaaagcgtggttgccttacgacaacttctgcctaactcccagagcttc
atccagcaatgtgttcagcagacttctagtgacatggtcattgctacctgtactacaaca
gtaacaacttctcctgtggtgacaactacagtgtcctcaagccagtctgaaaagtcaatt
attgtttctggagcaacagcacccagaactgtgtcagtgcaaactttgaacccacttgct
ggtccagtgggagcaaaagctggagttgtgacacttcattctgtgggcccaactgctgca
acaggaggaacaacagctggaactggtttgcttcagacttcaaaaccacttgtgacatct
gtggcaaacacagtgaccacggtctcactgcaacctgaaaagccagttgtctctggaaca
gcagtaacactgtcccttccagcagtaacttttggagaaacttcaggtgcagctatttgt
cttccatctgtgaaacctgttgtttcttctgctgggaccacatctgacaagcctgttatt
gggactccagttcaaatcaaacttgcccagccgggccctgtcctttcacaaccagctggg
attccacaggcagttcaagtcaagcaactagtagttcagcagccttcaggaggcaatgaa
aaacaagtgaccacaatttcacattcctcaacattgaccattcagaaatgtggacagaag
acgatgccagtgaacaccataatacctactagtcagtttcctccagcttccattctaaag
caaattactctgcctggaaataaaattctgtcacttcaagcatctcctactcagaaaaat
agaataaaagagaatgtaacatcatgcttccgagatgaggatgacatcaatgatgtgact
tctatggcaggggtcaaccttaatgaagaaaatgcctgcatcttagcaacaaactctgaa
ttggttggcacactcattcagtcatgtaaagatgaaccatttctttttattggagctcta
caaaagagaattttagacattggtaaaaagcatgacattacagaacttaactctgatgct
gtgaacttgatctcccaagcaacacaggaacgactacgaggccttctagaaaaactgact
gcaattgctcagcatcgaatgactacttacaaggcaagtgaaaattacatcctgtgtagt
gataccaggtcacagctcaaatttcttgaaaagctggatcaattggagaagcagagaaag
gatttggaagaaagagaaatgttacttaaggcagccaagagtcgttctaataaagaagat
ccagaacagctgagattaaagcagaaagccaaagagttacagcaattggaacttgcacag
atacagcatagagacgctaatctcacagctcttgcagctattggaccaaggaagaagaga
ccactagaatctggaattgagggcttaaaagacaaccttcttgcttctgggacatccagc
ctgacagccaccaaacagttgcatcgtccaagaatcacgagaatctgcctcagggacttg
atattttgtatggaacaggaacgggagatgaagtattctcgagctctatacctggccctt
ctgaagtga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (6)   
   UniGene (1)   
   HGNC (1)   
   ENSEMBL-HSA (1)   
   OC (1)   
   VEGA (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (19)   
   RefSeq(nuc) (1)   
   GenBank (9)   
   EMBL (9)   
Protein domain (2)   
   Pfam (2)   
All databases (41)   

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