KEGG T01001: 7307

Homo sapiens (human): 7307

Entry

7307 CDS T01001

Gene name

U2AF1, FP793, RN, RNU2AF1, U2AF35, U2AFBP

Definition

(RefSeq) U2 small nuclear RNA auxiliary factor 1

K12836

splicing factor U2AF 35 kDa subunit

Organism

hsa Homo sapiens (human)

Pathway

hsa03040	Spliceosome
hsa05131	Shigellosis

Disease

H01481

Myelodysplastic syndrome (MDS)

Brite

KEGG Orthology (KO) [BR:hsa00001]
Genetic Information Processing
  Transcription
   03040 Spliceosome
    7307 (U2AF1)
Human Diseases
  Infectious diseases
   05131 Shigellosis
    7307 (U2AF1)
Spliceosome [BR:hsa03041]
Complex A
  U2 snRNP components
   U2 related factors
    7307 (U2AF1)
Complex B
    7307 (U2AF1)

SSDB

Motif

Pfam:

zf-CCCH RRM_1 Torus KMP11 Nup35_RRM_2 zf-CCCH_3

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

OMIM:

HGNC:

Ensembl:

Vega:

Pharos:

Q01081(Tbio)

UniProt:

Q01081

Position

21q22.3

AA seq 240 aa
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQ
TADGSHCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKKHRSRSRSRERRSRSRDRGRGGGGGGGGGGGGRERDRRRSRDRERSGRF

NT seq 723 nt +upstreamnt +downstreamnt
atggcggagtatctggcctccatcttcggcaccgagaaagacaaagtcaactgttcattt
tatttcaaaattggagcatgtcgtcatggagacaggtgctctcggttgcacaataaaccg
acgtttagccagaccatcttgattcaaaacatctatcgtaatccccaaaacagtgcacag
acggctgacggctcacactgtgccgtgagcgatgtggagatgcaggaacactatgatgag
ttttttgaggaggtttttacagaaatggaggagaagtatggggaagtagaggagatgaac
gtctgtgacaacctgggagaccacctggtggggaacgtgtacgtcaagtttcgccgtgag
gaagatgcggaaaaggctgtgattgacttgaataaccgttggtttaatggacagccgatc
cacgccgagctgtcacccgtgacggacttcagagaagcctgctgccgtcagtatgagatg
ggagaatgcacacgaggcggcttctgcaacttcatgcatttgaagcccatttccagagag
ctgcggcgggagctgtatggccgccgtcgcaagaagcatagatcaagatcccgatcccgg
gagcgtcgttctcggtctagagaccgtggtcgtggcggtggcggtggcggtggtggaggt
ggcggcggacgggagcgtgacaggaggcggtcgagagatcgtgaaagatctgggcgattc
tga

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Disease (2)   
   KEGG DISEASE (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (97)   
   KEGG ORTHOLOGY (1)   
   RefGene (53)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   UniGene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (35)   
   OC (1)   
   PHAROS (1)   
   VEGA (1)   
Protein sequence (10)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (8)   
DNA sequence (38)   
   RefSeq(nuc) (8)   
   GenBank (15)   
   EMBL (15)   
Protein domain (6)   
   Pfam (6)   
All databases (158)   

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