KEGG T01001: 8930

Homo sapiens (human): 8930

Entry

8930 CDS T01001

Gene name

MBD4, MED1

Definition

methyl-CpG binding domain protein 4

Orthology

K10801

methyl-CpG-binding domain protein 4 [EC:3.2.2.-]

Organism

hsa Homo sapiens (human)

Pathway

hsa03410

Base excision repair

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:hsa03410]

SSDB

Motif

Pfam:

MBD HhH-GPD

Other DBs

NCBI-GI:

NCBI-GeneID:

OMIM:

HGNC:

HPRD:

Ensembl:

Vega:

UniProt:

Structure

PDB:

4E9F 4E9E 4EA4 4EA5 4E9G 3IHO 4DK9 4E9H

Position

3q21.3

AA seq 574 aa
MGTTGLESLSLGDRGAAPTVTSSERLVPDPPNDLRKEDVAMELERVGEDEEQMMIKRSSE
CNPLLQEPIASAQFGATAGTECRKSVPCGWERVVKQRLFGKTAGRFDVYFISPQGLKFRS
KSSLANYLHKNGETSLKPEDFDFTVLSKRGIKSRYKDCSMAALTSHLQNQSNNSNWNLRT
RSKCKKDVFMPPSSSSELQESRGLSNFTSTHLLLKEDEGVDDVNFRKVRKPKGKVTILKG
IPIKKTKKGCRKSCSGFVQSDSKRESVCNKADAESEPVAQKSQLDRTVCISDAGACGETL
SVTSEENSLVKKKERSLSSGSNFCSEQKTSGIINKFCSAKDSEHNEKYEDTFLESEEIGT
KVEVVERKEHLHTDILKRGSEMDNNCSPTRKDFTEDTIPRTQIERRKTSLYFSSKYNKEA
LSPPRRKAFKKWTPPRSPFNLVQETLFHDPWKLLIATIFLNRTSGKMAIPVLWKFLEKYP
SAEVARTADWRDVSELLKPLGLYDLRAKTIVKFSDEYLTKQWKYPIELHGIGKYGNDSYR
IFCVNEWKQVHPEDHKLNKYHDWLWENHEKLSLS

NT seq 1725 nt +upstreamnt +downstreamnt
atgggcacgactgggctggagagtctgagtctgggggaccgcggagctgcccccaccgtc
acctctagtgagcgcctagtcccagacccgccgaatgacctccgcaaagaagatgttgct
atggaattggaaagagtgggagaagatgaggaacaaatgatgataaaaagaagcagtgaa
tgtaatcccttgctacaagaacccatcgcttctgctcagtttggtgctactgcaggaaca
gaatgccgtaagtctgtcccatgtggatgggaaagagttgtgaagcaaaggttatttggg
aagacagcaggaagatttgatgtgtactttatcagcccacaaggactgaagttcagatcc
aaaagttcacttgctaattatcttcacaaaaatggagagacttctcttaagccagaagat
tttgattttactgtactttctaaaaggggtatcaagtcaagatataaagactgcagcatg
gcagccctgacatcccatctacaaaaccaaagtaacaattcaaactggaacctcaggacc
cgaagcaagtgcaaaaaggatgtgtttatgccgccaagtagtagttcagagttgcaggag
agcagaggactctctaactttacttccactcatttgcttttgaaagaagatgagggtgtt
gatgatgttaacttcagaaaggttagaaagcccaaaggaaaggtgactattttgaaagga
atcccaattaagaaaactaaaaaaggatgtaggaagagctgttcaggttttgttcaaagt
gatagcaaaagagaatctgtgtgtaataaagcagatgctgaaagtgaacctgttgcacaa
aaaagtcagcttgatagaactgtctgcatttctgatgctggagcatgtggtgagaccctc
agtgtgaccagtgaagaaaacagccttgtaaaaaaaaaagaaagatcattgagttcagga
tcaaatttttgttctgaacaaaaaacttctggcatcataaacaaattttgttcagccaaa
gactcagaacacaacgagaagtatgaggatacctttttagaatctgaagaaatcggaaca
aaagtagaagttgtggaaaggaaagaacatttgcatactgacattttaaaacgtggctct
gaaatggacaacaactgctcaccaaccaggaaagacttcactgaagataccatcccacga
acacagatagaaagaaggaaaacaagcctgtatttttccagcaaatataacaaagaagct
cttagccccccacgacgtaaagcctttaagaaatggacacctcctcggtcaccttttaat
ctcgttcaagaaacactttttcatgatccatggaagcttctcatcgctactatatttctc
aatcggacctcaggcaaaatggcaatacctgtgctttggaagtttctggagaagtatcct
tcagctgaggtagcaagaaccgcagactggagagatgtgtcagaacttcttaaacctctt
ggtctctacgatcttcgggcaaaaaccattgtcaagttctcagatgaatacctgacaaag
cagtggaagtatccaattgagcttcatgggattggtaaatatggcaacgactcttaccga
attttttgtgtcaatgagtggaagcaggtgcaccctgaagaccacaaattaaataaatat
catgactggctttgggaaaatcatgaaaaattaagtctatcttaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (9)   
   UniGene (1)   
   HGNC (1)   
   HPRD (1)   
   ENSEMBL-HSA (1)   
   OC (1)   
   VEGA (1)   
Protein sequence (8)   
   UniProt (3)   
   RefSeq(pep) (5)   
DNA sequence (33)   
   RefSeq(nuc) (5)   
   GenBank (14)   
   EMBL (14)   
3D Structure (8)   
   PDB (8)   
Protein domain (2)   
   Pfam (2)   
All databases (71)   

Download RDF

DBGET integrated database retrieval system