KEGG   Homo sapiens (human): 9129
Entry
9129              CDS       T01001                                 
Symbol
PRPF3, HPRP3, HPRP3P, PRP3, Prp3p, RP18, SNRNP90
Name
(RefSeq) pre-mRNA processing factor 3
  KO
K12843  U4/U6 small nuclear ribonucleoprotein PRP3
Organism
hsa  Homo sapiens (human)
Pathway
hsa03040  Spliceosome
Disease
H00527  Retinitis pigmentosa
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    9129 (PRPF3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hsa03041]
    9129 (PRPF3)
Spliceosome [BR:hsa03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    9129 (PRPF3)
SSDB
Motif
Pfam: PRP3 Prp3_C PWI
Other DBs
NCBI-GeneID: 9129
NCBI-ProteinID: NP_004689
OMIM: 607301
HGNC: 17348
Ensembl: ENSG00000117360
UniProt: O43395
Structure
Position
1:150321468..150353233
AA seq 683 aa
MALSKRELDELKPWIEKTVKRVLGFSEPTVVTAALNCVGKGMDKKKAADHLKPFLDDSTL
RFVDKLFEAVEEGRSSRHSKSSSDRSRKRELKEVFGDDSEISKESSGVKKRRIPRFEEVE
EEPEVIPGPPSESPGMLTKLQIKQMMEAATRQIEERKKQLSFISPPTPQPKTPSSSQPER
LPIGNTIQPSQAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGI
APPKVELKDQTKPTPLILDEQGRTVDATGKEIELTHRMPTLKANIRAVKREQFKQQLKEK
PSEDMESNTFFDPRVSIAPSQRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQAEISQAAR
KTGIHTSTRLALIAPKKELKEGDIPEIEWWDSYIIPNGFDLTEENPKREDYFGITNLVEH
PAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRISN
LMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKVKKIKKLKEDISQG
VHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLMLH
RIKWDEQTSNTKGDDDEESDEEAVKKTNKCVLVWEGTAKDRSFGEMKFKQCPTENMAREH
FKKHGAEHYWDLALSESVLESTD
NT seq 2052 nt   +upstreamnt  +downstreamnt
atggcactgtcaaagagggagctggatgagctgaaaccatggatagagaagacagtgaag
agggtcctgggtttctcagagcctacggtggtcacagcagcattgaactgtgtggggaag
ggcatggacaagaagaaggcagccgatcatctgaaaccttttcttgatgattctactctc
cgatttgtggacaaactgtttgaggctgtggaggaaggccgaagctctaggcattccaag
tctagcagtgacaggagcagaaaacgagagctaaaggaggtgtttggtgatgactctgag
atctctaaagaatcatcaggagtaaagaagcgacgaataccccgttttgaggaggtggaa
gaagagccagaggtgatccctgggcctccatcagagagccctggcatgctgactaagctc
cagatcaaacagatgatggaggcagcaacacgacaaatcgaggagaggaaaaaacagctg
agcttcattagcccccctacacctcagccaaagactccttcttcctcccaaccagaacga
cttcctattggcaacactattcagccctcccaggctgccactttcatgaatgatgccatt
gagaaggcaaggaaagcagctgaactgcaagctcgaatccaagcccagctggcactgaag
ccaggactcatcggcaatgccaacatggtgggcctggctaatctccatgccatgggcatt
gctcccccgaaggtggagttaaaagaccaaacgaaacctacaccactgatcctggatgag
caagggcgcactgtagatgcaacaggcaaggagattgagctgacacaccgcatgcctact
ctgaaagccaatattcgtgctgtgaagagggaacaattcaagcaacaactaaaggaaaag
ccatcagaagacatggaatccaataccttttttgacccccgagtctccattgccccttcc
cagcgccagagacgcacttttaaattccatgacaagggcaaatttgagaagattgctcag
cgattacggacaaaggctcaactggagaagctacaggcagagatttcacaagcagctcga
aaaacaggcatccatacttcgactaggcttgccctcattgctcctaagaaggagctaaag
gaaggagatattcctgaaattgagtggtgggactcttacataatccccaatggctttgat
cttacagaggaaaatcccaagagagaagattattttggaatcacaaatcttgttgaacat
ccagcccagctcaatcctccagttgacaatgacacaccagttactctgggagtatatctt
accaagaaggaacagaaaaaacttcggagacaaacaaggagggaagcacagaaggaacta
caagaaaaagtcaggctgggcctgatgcctcctccagaacccaaagtgagaatttctaat
ttgatgcgagtattaggaacagaagctgttcaagaccccacgaaggtagaagcccacgtc
agagctcagatggcaaaaagacagaaagcgcatgaagaggccaacgctgcccgaaaactc
acagcagaacagagaaaggtcaagaaaattaaaaagcttaaagaagacatttcacagggg
gtacacatatctgtatatagagttcgaaatttgagcaacccagccaagaagttcaagatt
gaagccaatgctgggcaactgtacctgacaggggtggtggtactgcacaaggatgtcaac
gtggtagtagtggaagggggccccaaggcccagaagaaatttaagcgtcttatgctgcat
cggataaagtgggatgaacagacatctaacacaaagggagatgatgatgaggagtctgat
gaggaagctgtgaagaaaaccaacaaatgtgtactagtctgggagggtacagccaaagac
cggagctttggagagatgaagtttaaacagtgtcctacagagaacatggctcgtgagcat
ttcaaaaagcatggggctgaacactactgggaccttgcgctgagtgaatctgtgttagag
tccactgattga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Disease (3)   
   KEGG DISEASE (1)   
   OMIM (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (8)   
   OC (1)   
Protein sequence (16)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (14)   
DNA sequence (64)   
   RefSeq(nuc) (22)   
   GenBank (21)   
   EMBL (21)   
3D Structure (10)   
   PDB (10)   
Protein domain (3)   
   Pfam (3)   
All databases (121)   

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