KEGG T01001: 9410

Homo sapiens (human): 9410

Entry

9410 CDS T01001

Gene name

SNRNP40, 40K, HPRP8BP, PRP8BP, PRPF8BP, RP11-490K7.3, SPF38, WDR57

Definition

small nuclear ribonucleoprotein 40kDa (U5)

Orthology

K12857

Prp8 binding protein

Organism

hsa Homo sapiens (human)

Pathway

hsa03040

Spliceosome

Module

hsa_M00355

Spliceosome, 35S U5-snRNP

Class

Genetic Information Processing; Transcription; Spliceosome [PATH:hsa03040]

SSDB

Motif

Pfam:

WD40 eIF2A Cytochrom_D1 Nup160 PD40

Other DBs

NCBI-GI:

NCBI-GeneID:

OMIM:

HGNC:

HPRD:

Ensembl:

Vega:

UniProt:

Position

1p35.2

AA seq 357 aa
MIEQQKRKGPELPLVPVKRQRHELLLGAGSGPGAGQQQATPGALLQAGPPRCSSLQAPIM
LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTD
GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD
IRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTG
LSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKI
AAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSDKRLYMGEIQ

NT seq 1074 nt +upstreamnt +downstreamnt
atgatagaacagcagaagcgtaagggcccagagttgccgctggttccagtcaagcggcag
cggcatgagttgctgttgggagcggggtctggcccaggagccgggcagcagcaggcgacg
ccgggagccttgctgcaagcgggacctccaagatgttcctcccttcaagccccaatcatg
ctgctctctggacatgaaggggaagtctactgctgcaagttccaccccaacggatccacc
ttagcatctgcaggatttgaccgactgatattactgtggaatgtctatggtgactgtgat
aactatgccacactgaagggacacagtggagcagtgatggaattgcattacaacacagat
ggcagtatgcttttctcagcatccacagataaaaccgtggctgtgtgggatagtgaaaca
ggtgagagggttaaaaggctaaagggacatacttcctttgtgaattcctgttatccagcc
aggagaggccctcagcttgtctgcactggcagtgacgatggcacagttaagctttgggac
atccggaagaaagcagccatccagacatttcagaacacgtaccaggtgttagctgtgacc
ttcaatgacacaagtgatcagattatttctggtggaatagacaatgatatcaaggtctgg
gacctgcgccagaacaagctaacctacaccatgagaggccatgcagattcagtgactggc
ctgagtttaagttctgaaggctcttatcttttgtccaatgcaatggacaatacagttcgt
gtctgggatgtccggccatttgcccccaaagagagatgtgtaaagatatttcaaggaaat
gtgcacaactttgaaaagaaccttctgagatgttcttggtcacctgatggaagcaaaata
gcagctggctcagccgacaggtttgtttatgtgtgggataccacaagcaggagaatattg
tataagctgcccggccatgctggctccatcaatgaagtggctttccaccctgatgagccc
atcattatctcagcatcgagtgacaagagactgtatatgggagagattcagtga

All links

Pathway (2)   
   KEGG PATHWAY (1)   
   KEGG MODULE (1)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (10)   
   UniGene (1)   
   HGNC (1)   
   HPRD (1)   
   ENSEMBL-HSA (1)   
   OC (1)   
   VEGA (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (25)   
   RefSeq(nuc) (1)   
   GenBank (12)   
   EMBL (12)   
Protein domain (5)   
   Pfam (5)   
All databases (55)   

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