KEGG T01001: 9627

Homo sapiens (human): 9627

Entry

9627 CDS T01001

Gene name

SNCAIP, SYPH1, Sph1

Definition

synuclein, alpha interacting protein

Orthology

K04558

synuclein, alpha interacting protein (synphilin)

Organism

hsa Homo sapiens (human)

Pathway

hsa05012

Parkinson's disease

Class

Human Diseases; Neurodegenerative diseases; Parkinson's disease [PATH:hsa05012]

SSDB

Motif

Pfam:

Ank_2 Ank Ank_4 Ank_5 Ank_3

Other DBs

NCBI-GI:

NCBI-GeneID:

OMIM:

HGNC:

HPRD:

Ensembl:

Vega:

UniProt:

Structure

PDB:

2KES

Position

5q23.2

AA seq 603 aa
MTYLIQSHHSRRSQNCAEDVIRKTKTDQNGQLECVRWMVSETEAIAELSCSKDFPSLIHY
AGCYGQEKILLWLLQFMQEQGISLDEVDQDGNSAVHVASQHGYLGCIQTLVEYGANVTMQ
NHAGEKPSQSAERQGHTLCSRYLVVVETCMSLASQVVKLTKQLKEQTVERVTLQNQLQQF
LEAQKSEGKSLPSSPSSPSSPASRKSQWKSPDADDDSVAKSKPGVQEGIQVLGSLSASSR
ARPKAKDEDSDKILRQLLGKEISENVCTQEKLSLEFQDAQASSRNSKKIPLEKRELKLAR
LRQLMQRSLSESDTDSNNSEDPKTTPVRKADRPRPQPIVESVESMDSAESLHLMIKKHTL
ASGGRRFPFSIKASKSLDGHSPSPTSESSEPDLESQYPGSGSIPPNQPSGDPQQPSPDST
AAQKVATSPKSALKSPSSKRRTSQNLKLRVTFEEPVVQMEQPSLELNGEKDKDKGRTLQR
TSTSNESGDQLKRPFGAFRSIMETLSGNQNNNNNYQAANQLKTSTLPLTSLGRKTDAKGN
PASSASKGKNKAEMYSSCINLSSNMLIEEHLCNDTRHNDINRKMKKSYSIKHIAEPESKE
LFL

NT seq 1812 nt +upstreamnt +downstreamnt
atgacatatcttattcagtcacatcactcaagacgatcccagaactgtgccgaagatgtg
atacgcaaaacgaagacagatcagaatggtcagttggagtgcgtacgctggatggtgagc
gaaacagaagccattgcagaactgagttgttctaaggattttccaagccttattcattac
gcaggttgctatggccaggaaaagattcttctgtggcttcttcagtttatgcaagaacag
ggcatctcgttggatgaagtagaccaggatggcaacagtgccgttcacgtagcctcacag
catggctaccttggatgcatacagaccttggttgaatatggagcaaatgtcaccatgcag
aaccacgctggggaaaagccctcccagagcgccgagcggcaggggcacaccctgtgctcc
aggtacctggtggtggtggagacctgcatgtcgctggcctctcaagtggtgaagttaacc
aagcagctaaaggaacaaacagtagaacgtgtcacgctgcagaaccaactccaacaattt
ctagaagcccagaaatcagagggcaagtcactcccttcttcacccagttcaccatcctca
cctgcctccagaaagtcccagtggaaatctccagatgcagatgatgattctgtagccaaa
agcaagccaggagtccaagaggggattcaggttcttggaagcctgtcagcctccagccgg
gctagacccaaagcaaaagatgaagattctgataaaatcttacgccagttattgggaaag
gaaatctcagaaaatgtctgcacccaggaaaaactgtccttggaattccaggatgctcag
gcttcctctagaaattctaaaaagatcccactggagaagagggaactgaagttagccagg
ctgagacagctgatgcagaggtcactgagtgagtctgacacagactccaacaactctgag
gaccccaagactaccccagtgaggaaggctgaccgaccaaggccgcagcccattgtagaa
agcgtagagagtatggacagcgcagaaagcctgcacctgatgattaagaaacacaccttg
gcatcagggggacgcaggtttcctttcagcatcaaggcctccaaatccctggatggccac
agcccatctcccacctcagagagcagcgaaccagacttagaatcccagtatccaggctca
gggagtattcctccaaaccagccctctggtgaccctcagcagcccagccctgacagtact
gctgcccagaaagttgccacaagtcccaagagtgccctcaagtctccatcttccaagcgt
aggacatctcagaacttaaaactgagagttacctttgaggagcctgtggtgcagatggag
cagcctagccttgaactgaatggagaaaaagacaaagataagggcaggactctccagcgg
acctccacaagtaacgaatcgggggatcaactgaaaaggccttttggagcctttcgatct
atcatggagacactaagtggcaaccaaaacaataataataactaccaggcagccaaccag
ctgaaaacctctacattgcccttgacctcacttgggaggaagacagatgccaagggaaac
cctgccagctccgctagcaaaggaaagaataaggcagaaatgtacagcagctgcatcaat
ctttcctctaacatgctgattgaagagcatctgtgtaacgacacacggcataatgacatc
aatagaaaaatgaagaaatcctacagcataaagcacattgctgagccagagtcaaaagaa
ctcttcttgtaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Disease (2)   
   OMIM (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (18)   
   UniGene (1)   
   HGNC (1)   
   HPRD (1)   
   ENSEMBL-HSA (1)   
   OC (1)   
   VEGA (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (42)   
   RefSeq(nuc) (2)   
   GenBank (20)   
   EMBL (20)   
3D Structure (1)   
   PDB (1)   
Protein domain (5)   
   Pfam (5)   
All databases (82)   

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