KEGG   Homo sapiens (human): 9887Help
Entry
9887              CDS       T01001                                 

Gene name
SMG7, C1orf16, EST1C, SGA56M
Definition
SMG7 nonsense mediated mRNA decay factor (EC:2.7.11.1)
Orthology
K14409  
protein SMG7
Organism
hsa  Homo sapiens (human)
Pathway
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:hsa00001]
 Genetic Information Processing
  Translation
   03015 mRNA surveillance pathway
    9887 (SMG7)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic Type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance  factors
     9887 (SMG7)
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     9887 (SMG7)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
OMIM: 
HGNC: 
HPRD: 
Ensembl: 
Vega: 
UniProt: 
Structure
PDB: 

Jmol
Position
1q25
AA seq 1145 aa AA seqDB search
MLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFY
TQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIA
RYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAA
STNLQKALSKALESRDEVKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLEEQFKR
LLFQKAFNSQQLVHVTVINLFQLHHLRDFSNETEQHTYSQDEQLCWTQLLALFMSFLGIL
CKCPLQNESQEESYNAYPLPAVKVSMDWLRLRPRVFQEAVVDERQYIWPWLISLLNSFHP
HEEDLSSISATPLPEEFELQGFLALRPSFRNLDFSKGHQGITGDKEGQQRRIRQQRLISI
GKWIADNQPRLIQCENEVGKLLFITEIPELILEDPSEAKENLILQETSVIESLAADGSPG
LKSVLSTSRNLSNNCDTGEKPVVTFKENIKTREVNRDQGRSFPPKEVRRDYSKGITVTKN
DGKKDNNKRKTETKKCTLEKLQETGKQNVAVQVKSQTELRKTPVSEARKTPVTQTPTQAS
NSQFIPIHHPGAFPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFPAGVSVPGTFLQPTAHS
PAGNQVQAGKQSHIPYSQQRPSGPGPMNQGPQQSQPPSQQPLTSLPAQPTAQSTSQLQVQ
ALTQQQQSPTKAVPALGKSPPHHSGFQQYQQADASKQLWNPPQVQGPLGKIMPVKQPYYL
QTQDPIKLFEPSLQPPVMQQQPLEKKMKPFPMEPYNHNPSEVKVPEFYWDSSYSMADNRS
VMAQQANIDRRGKRSPGVFRPEQDPVPRMPFEDPKSSPLLPPDLLKSLAALEEEEELIFS
NPPDLYPALLGPLASLPGRSLFKSLLEKPSELMSHSSSFLSLTGFSLNQERYPNNSMFNE
VYGKNLTSSSKAELSPSMAPQETSLYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSL
PSSPPTHNHNSVPFSNFGPIGTPDNRDRRTADRWKTDKPAMGGFGIDYLSATSSSESSWH
QASTPSGTWTGHGPSMEDSSAVLMESLKSIWSSSMMHPGPSALEQLLMQQKQKQQRGQGT
MNPPH
NT seq 3438 nt NT seq  +upstreamnt  +downstreamnt
atgctagttaccgatttggaatacgctttagacaagaaagtagaacaggatctctggaat
cacgcctttaagaatcagatcacaacactgcaaggccaggcaaagaatcgagcaaatccg
aatcggagtgaagttcaggcaaacctttctctgttcctagaggcagctagtggcttctat
actcagttattacaagaactgtgtacagtatttaatgtagatttaccatgccgtgtgaag
tcttcccaattgggaattatcagcaataaacagacgcataccagcgccatagtgaagcca
cagtctagctcctgttcctatatctgccagcactgcctcgtccaccttggagacattgct
cgatacagaaaccagaccagccaggcagagtcctactataggcatgcagctcagcttgtc
ccctccaatggtcagccttataatcagttggctatcttagcttcttccaaaggagaccat
ctgaccacaattttctactactgcagaagcattgctgtgaagttccctttcccagctgcc
tccactaatctgcaaaaagcactttctaaagcactggaaagccgagatgaggtgaaaacc
aagtggggtgtttctgacttcatcaaggcctttattaaattccacggtcatgtgtacctg
agtaagagcttggaaaagttgagccctcttcgagagaaattggaagaacagtttaagagg
ctgctattccaaaaagctttcaactctcagcagttagttcatgtcactgtcattaacctg
tttcaacttcatcaccttcgtgactttagcaatgaaaccgagcagcacacttatagccaa
gatgagcagctatgttggacacagttgctggccctctttatgtcttttcttggcatcctg
tgcaagtgtcctctacagaatgagtctcaggaggagtcctacaatgcctatcctcttcca
gcagtcaaggtctccatggactggctaagactcagacccagggtctttcaggaggcagtg
gtggatgaaagacagtacatttggccctggttgatttctcttctgaatagtttccatccc
catgaagaggacctctcaagtattagtgcgacaccacttccagaggagtttgaattacaa
ggatttttggcattgagaccttctttcaggaacttggatttttccaaaggtcaccagggt
attacaggggacaaagaaggccagcaacgacgaatacgacagcaacgcttgatctctata
ggcaaatggattgctgataatcagccaaggctgattcagtgtgaaaatgaggtagggaaa
ttgttgtttatcacagaaatcccagaattaatactggaagaccccagtgaagccaaagag
aacctcattctgcaagaaacatctgtgatagagtcgctggctgcagatgggagcccaggg
ctaaaatcagtgctatctacaagccgaaatttaagcaacaactgtgacacaggagagaag
ccagtggttaccttcaaagaaaacattaagacacgagaagtgaacagagaccaaggaaga
agttttcctcccaaagaggtgagaagggactatagcaaaggaataactgtaactaagaat
gatggaaagaaggacaacaacaagaggaaaactgaaaccaagaaatgcaccttagaaaag
ttacaggaaacaggaaagcagaatgtggcagtgcaggtaaaatcccagacagaactaaga
aagactccagtgtctgaagccagaaaaacacctgtaactcaaaccccaactcaagcaagt
aactcccagttcatccccattcatcaccctggagccttccctcctcttcccagcaggcca
gggtttccgcccccaacatatgttatccccccgcctgtggcattttctatgggctcaggt
tacaccttcccagctggtgtttctgtcccaggaacctttcttcagcctacagctcactct
ccagcaggaaaccaggtgcaagctgggaaacagtcccacattccttacagccagcaacgg
ccctctggaccagggccaatgaaccagggacctcaacaatcacagccaccttcccagcaa
ccccttacatctttaccagctcagccaacagcacagtctacaagccagctgcaggttcaa
gctctaactcagcaacaacaatcccctacaaaagctgtgccggctttggggaaaagcccg
cctcaccactctggattccagcagtatcaacaggcagatgcctccaaacagctgtggaat
ccccctcaggttcaaggcccattagggaaaattatgcctgtgaaacagccctactacctt
cagacccaagaccccataaaactgtttgagccgtcattgcaacctcctgtaatgcagcag
cagcctctagaaaaaaaaatgaagccttttcccatggagccatataaccataatccctca
gaagtcaaggtcccagaattctactgggattcttcctacagcatggctgataacagatct
gtaatggcacagcaagcaaacatagaccgcaggggcaaacggtcaccaggagtcttccgt
ccagagcaggatcctgtacccagaatgccgtttgaggaccccaagagctcccctctgctt
cctccggacctgttaaagagtctggctgccttggaggaagaggaagagctgattttttct
aaccctcctgatctttacccggctctgctggggcctctcgcctctcttcctggacgaagc
ctttttaaatccttattggagaagccctcagagctcatgtcacattcatcctctttcctg
tccctcaccggattctctctcaatcaggaaagatacccaaataatagtatgttcaatgag
gtatatgggaaaaacctgacatccagctccaaagcagaactcagtccctcaatggccccc
caggaaacatctctgtattccctttttgaagggactccgtggtctccatcacttcctgcc
agttcagatcattcaacaccagccagccagtctcctcattcctctaacccaagcagccta
cccagctctcctccaacacacaaccataattctgttccattctccaattttggacccatt
gggactccagataacagggatagaaggactgcagatcggtggaaaactgataagccagcc
atgggtgggtttggcattgattatctctcagcaacgtcatcctctgagagcagttggcat
caggccagcactccgagtggcacctggacaggccatggcccttccatggaggattcctct
gctgtcctcatggaaagcctaaagtctatctggtccagttccatgatgcatcctggacct
tctgctctggagcagctgttaatgcagcagaagcagaaacagcaacggggacaaggcacc
atgaaccctccacactga

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