KEGG   Acetivibrio saccincola: HVS_15535
Entry
HVS_15535         CDS       T05223                                 
Symbol
pcrA2
Name
(GenBank) ATP-dependent DNA helicase PcrA
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
hsc  Acetivibrio saccincola
Pathway
hsc03420  Nucleotide excision repair
hsc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hsc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    HVS_15535 (pcrA2)
   03430 Mismatch repair
    HVS_15535 (pcrA2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hsc03400]
    HVS_15535 (pcrA2)
Enzymes [BR:hsc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HVS_15535 (pcrA2)
DNA repair and recombination proteins [BR:hsc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     HVS_15535 (pcrA2)
   MMR (mismatch excision repair)
    Other MMR factors
     HVS_15535 (pcrA2)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PcrA_UvrD_tudor UvrD_C_2 AAA_30 Viral_helicase1 AAA_11 AAA_14 CarD_TRCF_RID
Other DBs
NCBI-ProteinID: AUG58948
UniProt: A0A2K9E8U0
Position
complement(3405405..3407636)
AA seq 743 aa
MDLLSALNKEQREAVLHVDGPLLVLAGAGSGKTRVLTHRIAYLISEKNVHPASILAITFT
NKAAREMRERIDALVGRFSDYIWVSTFHSMCVRMLRRDIEKIGYGSNFVIFDYSDQQTLV
KECLKELNINDKNFPPKSVLSAIGRAKDELITPEKFTKMYQTDFRMSKVAKIYELYQKKL
KNNNALDFDDIIMHTIKLFTEHPEVLEYYQRKFKYILVDEYQDTNTAQYVLVSMLAKEHK
NLCVVGDDDQSIYGWRGANIRNILDFEKDFKNTKVIKLEQNYRSTKTILEAANSVIKNNH
GRKSKKLWTDNEEGDPISVSECINEHQEAHFIAGEIKRLREKENFKLRDFAVLYRINAMS
RVIEEMFMKEGIAYKIFGGLKFYDRKEIKDIIAYLRVIQNPSDNISLKRIINEPKRGIGN
TTLETAERYANEAEVSIFTVISNASKIPGLSRAASKLEDFASMINVLRTLKNTMTASEII
EEVIERTGIVRKYEEENTPESETRIENIKELLSVALEFEAQSEEKGLEEFLEHISLVTDV
DEMDDESDYVVLMTLHSAKGLEFPVVFMPGLEEGVFPGYRSMLSEDELEEERRLCYVGIT
RARKKLYITHTFTRTLFGNTTHNRASRFLDEIPDKYTCAEDTNEVGIKSAANKLPFINQF
NKTFNPAAGFKPQNAINPRGASQAGKKTTLEFNKGDQVEHKKFGFGIVTSVEKENDDYKL
EIHFKGVGMKRLMASFANLVKIK
NT seq 2232 nt   +upstreamnt  +downstreamnt
atggatttattaagtgctttaaataaagaacaaagggaagctgtacttcatgtggatggg
ccactccttgtgttagcaggtgcaggaagtggtaagacaagggttttgacccaccgtatt
gcttatttaataagtgaaaaaaatgtacatccggcaagtatccttgcaattacatttaca
aataaagcagcccgggaaatgcgggagagaatagatgcccttgtaggtaggtttagtgat
tacatatgggttagtacatttcactctatgtgtgtcagaatgcttagaagggatattgaa
aagattggatacggaagcaattttgttatatttgactattcagatcagcaaacccttgtt
aaggaatgccttaaagaactaaatataaatgacaaaaactttccgccaaaatctgtcctt
tcagcaataggaagagcaaaggatgagctgattacacctgaaaaatttacaaaaatgtat
cagacggatttcaggatgagcaaagttgcaaaaatttatgaactgtatcaaaaaaagcta
aaaaacaacaatgcccttgattttgatgacataataatgcatacaattaagctgtttaca
gagcatcctgaagttttggaatactatcagagaaagtttaaatatatacttgtggatgag
tatcaggatacaaatacagcacaatatgtgctggttagtatgttggcaaaagaacacaag
aatctgtgtgtggtaggggatgacgaccagtcaatatacggctggagaggtgctaatatt
agaaatatactggattttgaaaaggattttaaaaacaccaaagtaattaaacttgagcaa
aactaccgctctacaaagacaatacttgaggctgcaaacagcgtaatcaaaaataaccac
ggaagaaaaagcaaaaaactttggactgacaatgaagagggagatcctataagtgtatca
gagtgcattaatgagcaccaggaagctcattttattgccggtgaaataaaaaggctaaga
gagaaggaaaattttaaactaagggattttgcagtattgtacagaataaatgccatgtcc
cgtgttatagaagaaatgtttatgaaagaaggcattgcttataaaatatttggagggcta
aagttttatgacagaaaagaaattaaagacattatagcttatttaagggttatccaaaac
ccttcagacaatataagtttaaaaaggataataaatgagccaaaaaggggtattggaaac
actactttagaaacggcagaaagatatgccaatgaggcagaagtgagtatattcactgta
atttccaatgcttcaaagatacccggtttgtcaagggcggcgtcaaagctggaagatttt
gcatcaatgataaatgtcctcagaacattaaaaaacaccatgacagcatctgagataatt
gaagaagttattgaaaggacagggatagttagaaaatacgaggaagaaaatacccctgaa
tcagaaacccggatagagaatataaaagagcttttatccgttgctttagagtttgaagct
caaagcgaagaaaagggattagaagaatttttagagcacatctcgttggttactgatgtg
gacgagatggatgatgaaagtgattatgttgttttgatgacgctgcacagtgcaaaaggt
cttgagtttcccgttgtatttatgccgggattggaggagggggttttcccagggtacagg
tccatgttaagtgaagatgaacttgaagaggagagaagactttgctatgtgggaattacc
agggcaagaaaaaaactctacatcactcatacttttaccagaactttatttggaaatact
acccataacagagcttccagatttttagatgaaatcccagacaaatatacctgtgctgag
gacaccaatgaagtgggaataaaatccgcagcaaataaactaccttttataaaccaattt
aataaaacatttaaccctgctgccggttttaagcctcagaatgcaattaacccccgtggt
gcaagccaggccggtaaaaaaaccactttagaatttaacaaaggagatcaagtggagcat
aaaaaatttggttttggaattgtaacctctgttgaaaaagaaaatgatgattacaaattg
gagatacattttaaaggggtgggtatgaaaaggttaatggcctcatttgccaatttggta
aaaataaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (159)   
   KEGG ORTHOLOGY (1)   
   RefGene (156)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (177)   

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