KEGG   Herbinix luporum: SD1D_1038
Entry
SD1D_1038         CDS       T04072                                 
Name
(GenBank) hypothetical protein
  KO
K09761  16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
Organism
hsd  Herbinix luporum
Brite
KEGG Orthology (KO) [BR:hsd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hsd03009]
    SD1D_1038
Enzymes [BR:hsd01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.193  16S rRNA (uracil1498-N3)-methyltransferase
     SD1D_1038
Ribosome biogenesis [BR:hsd03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    SD1D_1038
SSDB
Motif
Pfam: Methyltrans_RNA PUA_4 KDGP_aldolase Sensor_TM1
Other DBs
NCBI-ProteinID: CUH92584
UniProt: A0A0K8J5E9
Position
I:1123770..1124510
AA seq 246 aa
MHRFYVNEKQIHDNLITIIGSDVNHIKNVLRMRCGDELVICNGQGKDYYCIINRVSDGEI
EAKIDFVKDTGSELQTKITLFQGLPKSDKMELIIQKAVELGVYEVVPVTMARCVVKNTDK
KKEEKKLLRWQAIAESAAKQSHRGIIPKVRPIMSFKEAINYASKMDLSLLPYENEKGMEA
TREAIFKLKDCQSAGIIIGPEGGFEEAEVKLAKDHGIIPISLGRRILRTETAALATLSMM
ILYLED
NT seq 741 nt   +upstreamnt  +downstreamnt
atgcatcgtttttatgttaatgaaaagcaaattcatgataatcttattaccataattggc
tcagatgtaaatcatataaaaaatgtactccgcatgagatgtggggatgaattggtaatt
tgcaatggacaaggaaaagattattattgtataattaatagggtatctgatggggaaata
gaagcaaagatagattttgttaaggatacaggaagtgaacttcaaacgaaaataactctc
tttcaaggtcttcctaaatccgataagatggaactgattatacaaaaggctgttgaactg
ggtgtatatgaggtggtacctgttaccatggccagatgtgttgttaaaaacactgataaa
aagaaggaagaaaagaaattactgcgctggcaggctattgccgaaagtgcagcaaagcag
tcccatagagggattataccaaaagttagacctattatgtcatttaaggaagcaataaac
tatgcatcaaagatggatttatcacttcttccttatgaaaatgaaaaagggatggaggcc
acaagggaggctatttttaagttgaaagactgccaaagtgcaggaataataattggccct
gagggaggttttgaagaggctgaagttaaactggccaaggaccatggtattattcctatt
tctttgggaagaagaatacttagaaccgaaacagcggctttggcaactttatccatgatg
attttatatttagaagactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (41)   

Download RDF
DBGET integrated database retrieval system