KEGG T01268: Hsero

Herbaspirillum seropedicae: Hsero_0338

Entry

Hsero_0338 CDS T01268

Gene name

ddlB

Definition

D-alanine--D-alanine ligase (EC:6.3.2.4)

Orthology

K01921

D-alanine-D-alanine ligase [EC:6.3.2.4]

Organism

hse Herbaspirillum seropedicae

Pathway

hse00473	D-Alanine metabolism
hse00550	Peptidoglycan biosynthesis
hse01100	Metabolic pathways

Class

Metabolism; Metabolism of other amino acids; D-Alanine metabolism [PATH:hse00473]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:hse00550]

SSDB

Motif

Pfam:

Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 ATP-grasp_3 ATP-grasp TTL ATPgrasp_Ter CPSase_L_D2

Other DBs

NCBI-GI:

300309680

NCBI-GeneID:

9400939

UniProt:

D8IW66

Position

373524..374528

AA seq 334 aa
MISQDQIKAFGRVGVLFGGRSAEREVSMMSGNGVLQALRSKGVDAHPFDPAERSLGELQA
EQFDRVFIALHGRYGEDGTLQGALEQMGLPYTGPGVMSSSIAMDKVMTKRIWLSHGLPTP
RFLTLDAQATTREQLRLVPDTLGLPLMLKAPHEGSTIGIAKVNGYSDMQEGFDLCARYDK
VVLAEEFIRGRELTVPVLGTGSAARALPVIEIRAPEGNYDYQNKYFTDDTKYLCPAPLDE
ELTRHLQNLAVQAFNALGCRGWSRVDFMLREVDGKAEPYLLEINTSPGMTGHSLVPMAAK
AVGMSYEDLCCEILQMAALDMTPSKDWTPQAGQS

NT seq 1005 nt +upstreamnt +downstreamnt
atgatcagccaggaccagatcaaggcctttggccgcgtcggcgtgctcttcggtggccgt
tcggccgagcgcgaagtgtcgatgatgtcgggcaacggtgtcttgcaggccttgcgcagc
aagggcgtggacgcccatcccttcgatccggccgagcgcagcctgggtgagttgcaggcc
gagcagttcgatcgcgtcttcatcgccctgcatggccgctatggcgaggacggcaccttg
caaggcgcgctggaacagatgggcctgccctacacgggaccgggcgtgatgtcttccagc
atcgccatggacaaggtcatgaccaagcgcatctggctctcgcatgggctgcccacgccg
cgcttcctgactctggacgcccaggcgaccacccgcgaacagctgcgcctggtgcccgat
acgctgggcctgccgctgatgctcaaggcgccgcacgagggctccaccatcggcatcgcc
aaggtcaacggctattcggacatgcaggaaggcttcgacctctgcgctcgctacgacaag
gtggtgctggccgaggagttcatccgtggccgcgaactgacggtgccggtgctgggcacg
ggcagcgctgcacgcgccttgccggtcatcgagatccgggcaccggagggtaactatgat
taccagaacaagtatttcaccgacgacacgaaatatttgtgtccggccccgctggatgag
gaactgacgcgccatctgcagaatctggcggtacaggccttcaatgccttgggttgccgt
ggctggagccgtgtcgacttcatgttgcgcgaagtcgatggcaaggccgagccctacctg
ctggaaatcaacacctcccccggcatgaccggccattcgctggtgccgatggcggccaag
gcggtgggcatgagctacgaggatctgtgttgcgagatcttgcagatggcggcgctggac
atgacgccttccaaggattggacgccgcaggcgggccagtcgtga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (25)   

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