KEGG   Herbaspirillum seropedicae SmR1: Hsero_1620
Entry
Hsero_1620        CDS       T01268                                 
Symbol
nth
Name
(GenBank) endonuclease III protein
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
hse  Herbaspirillum seropedicae SmR1
Pathway
hse03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hse00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Hsero_1620 (nth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hse03400]
    Hsero_1620 (nth)
Enzymes [BR:hse01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Hsero_1620 (nth)
DNA repair and recombination proteins [BR:hse03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Hsero_1620 (nth)
 Prokaryotic type
     Hsero_1620 (nth)
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S RecR_HhH HHH_5 HHH_8
Other DBs
NCBI-ProteinID: ADJ63133
UniProt: D8IQM2
Position
complement(1845024..1845674)
AA seq 216 aa
MNPTKRREIFERLRQANPTPTTELEYTTPFELLIAVLLSAQATDVSVNKATRKLYPVANT
PEAIYRMGVDQLMPYIQTIGLYRTKAKNVIETCRILIEEHGGQVPESREALEALPGVGRK
TANVVLNTAFGHPTIAVDTHIFRVSNRTGLAPGKDVDEVERKLIKFVAPEFRQDAHHWLI
LHGRYTCIARKPQCWNCIIADLCEFKQKTPLPSKGV
NT seq 651 nt   +upstreamnt  +downstreamnt
atgaatcccaccaaacgccgcgagatcttcgagcgcctgcgccaggccaatcccaccccc
accaccgagctggaatacaccacgcccttcgagctgctcattgccgtgctgctctcggcg
caggccaccgatgtctcggtcaacaaggccacgcgcaagctctacccggtggccaacacg
cccgaggcgatctaccgcatgggcgtggaccagctcatgccctacatccagaccattggc
ctgtaccgcaccaaggccaagaatgtcatcgagacctgccgcatcctgatcgaagaacac
ggcggccaagtgccggagtcgcgcgaggcgctcgaagcgctgccgggcgtggggcgcaag
acggccaatgtggtcttgaataccgcctttggccatcccaccatcgcggtcgatacgcat
atcttccgcgtgtccaaccgcacggggctggcgccgggcaaggatgtggacgaggtcgag
cgcaagctcatcaagttcgtcgcgcccgaattccgccaggatgcccatcactggctgatc
ctgcatggccgctatacctgcatcgcgcgcaagccgcaatgctggaactgcatcattgcc
gacctctgcgaattcaagcagaagaccccgctgccgagcaagggcgtctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (24)   

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