KEGG   Herbaspirillum seropedicae: Hsero_2160Help
Entry
Hsero_2160        CDS       T01268                                 

Gene name
dapE
Definition
succinyl-diaminopimelate desuccinylase (EC:3.5.1.18)
Orthology
K01439  
succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
Organism
hse  Herbaspirillum seropedicae
Pathway
Lysine biosynthesis
Metabolic pathways
Microbial metabolism in diverse environments
Biosynthesis of amino acids
Module
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:hse00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    Hsero_2160 (dapE)
  Amino acid metabolism
   00300 Lysine biosynthesis
    Hsero_2160 (dapE)
Enzymes [BR:hse01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.18  succinyl-diaminopimelate desuccinylase
     Hsero_2160 (dapE)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(2425445..2426578)
Genome map
AA seq 377 aa AA seqDB search
MIMSKTLALTQELMSLSSVTPEDKGCQARLAELLTPLGFVCETIQSGEVTNLWARKGTAQ
PLVVFAGHTDVVPTGPLEKWQSHPFQPTLREGRLYGRGASDMKTSIAAMVVACEEFTAAH
PDHKGSIGFLITSDEEGPAIDGTVVVCNALKARGEQLDYCIVGEPTSAKTLGDMIKNGRR
GTMSGKLTVKGIQGHIAYPQLARNPIHQAAPALAELVAEQWDAGNEYYLPTSWQISNIHG
GTGASNVIPGEVMIDFNFRFSTASTVEGLQQRVHAILDKHGLEYDLKWTVGGLPFLTPRG
DLSDALSKAIKDETGLDTELSTTGGTSDGRFIAQICPQVIEFGPPNDSIHKIDEHIEVRY
IDPLKNIYRKTLENLLA
NT seq 1134 nt NT seq  +upstreamnt  +downstreamnt
atgatcatgagcaagacgctggccctgacccaggaattgatgtccctttcttccgtcacc
cccgaagacaaaggctgccaggccaggctggcggaattgctcacgccgctgggcttcgtc
tgcgagaccatccagtccggcgaggtgaccaacctgtgggcgcgcaagggtacggcgcag
ccgttggtggtctttgccggccacaccgacgtggtgccgaccggtccgctggagaaatgg
cagtcgcatcccttccagccgaccctgcgcgagggccgcctgtacggtcggggcgcctcc
gacatgaagacctcgattgccgccatggtggtggcttgcgaagagttcacggcggcccat
cccgatcacaagggttccatcggcttcctcatcaccagcgatgaagagggcccggccatc
gacggcaccgtggtggtctgcaatgccctcaaggcacgcggcgaacaactggattactgc
atcgtcggtgaaccgacctcggccaagaccctgggcgacatgatcaagaacggccgccgc
ggcaccatgtcgggcaagctgaccgtcaagggcatccagggccatatcgcctatccgcaa
ctggcgcgcaaccccatccaccaggcggcgccggcactggctgaactggtggccgaacag
tgggatgcgggcaatgaatactacctgccgacgtcctggcagatctccaacatccatggc
ggcacgggtgcatccaacgtgatcccgggtgaggtgatgatcgacttcaacttccgtttc
tccaccgccagtaccgtggagggcctgcagcagcgcgtgcatgccatcctcgacaagcat
ggcctggaatatgacctgaagtggaccgtcggcggcctgcccttcctgaccccgcgcggc
gatctgtcggatgccctgtccaaggcgatcaaggacgagaccgggctggacaccgagctg
tccaccaccggcggcacttccgatggacgcttcatcgcccagatctgcccgcaggtgatc
gagttcggcccacccaatgacagcatccacaagatcgatgagcacatcgaagtgcgctac
atcgatcccttgaagaacatctaccgcaagacgctggaaaacctgctggcctga

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