KEGG   Herbaspirillum seropedicae SmR1: Hsero_2296
Entry
Hsero_2296        CDS       T01268                                 
Name
(GenBank) transcription regulator DNA-binding repressor protein
  KO
K02529  LacI family transcriptional regulator, galactose operon repressor
Organism
hse  Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:hse00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hse03000]
    Hsero_2296
Transcription factors [BR:hse03000]
 Prokaryotic type
  Helix-turn-helix
   LacI family
    Hsero_2296
SSDB
Motif
Pfam: Peripla_BP_3 Peripla_BP_1 Peripla_BP_4 LacI PF0610-like_N HTH_Tnp_ISL3 HTH_31 MerR HTH_3 HTH_23
Other DBs
NCBI-ProteinID: ADJ63795
UniProt: D8IUD3
Position
2596476..2597489
AA seq 337 aa
MATIKDVARLAGVSYTTVSHVLNQTRPVSSDARERVLAAVKELDYVPSALARSLRSKVTG
SIGLIIPNNTNPYFSELARGIEDHCYGAGYSVILCNSDDDPDKQRDYLQVLQTKHCDGLI
IATLNQADLNPAGKLDIPTVLLDRAPKELDIDLVSTDNAVGGSLAARHLLDLRRCRVACI
AGPDGLELSDERVRGFRQTLEQGGLALADSDLLHADFSGIGGYQAAMRLLQGRPADQRPD
AIFCCNDMMAIGVLRAAGELQIEVPGELSVVGFDDIELAQFVHPPLTTVAQNTRKLGNLT
AQFLLERIADPSLPARRETVAPQLQLRGSTAPRVNPT
NT seq 1014 nt   +upstreamnt  +downstreamnt
atggccaccatcaaggatgtcgccaggctggccggggtgtcctacaccacggtctcgcac
gtgctcaaccagacgcgtccggtcagcagtgacgcgcgcgagcgcgtgctggccgccgtc
aaggaactggactacgtgcccagcgccctggcgcgctcgctgcgcagcaaggtcaccggc
agtatcggcctgatcatccccaacaacaccaacccgtatttctcggaactggcgcgcggg
atcgaggaccactgctatggcgccggctacagcgtcatcctgtgcaattccgacgacgac
cccgacaagcagcgcgactacctgcaagtcttgcagaccaagcactgcgacggcctcatc
atcgccaccctgaaccaggccgatctcaatccggccggcaagctggacattcccacggtg
ctgctggaccgcgcccccaaggagctggacatcgacctggtcagcaccgacaacgccgtc
ggcggcagcctggcggcgcgccatctgctggatttgcgccgctgccgcgtggcctgcatc
gccggtcctgacgggctggaattgtcggacgaacgggtgcggggcttccgccagaccctg
gagcagggcggcctggccctggccgacagtgacctgctgcatgccgacttcagtggcatc
ggcggttaccaggccgccatgcgcctgctgcagggacgcccggccgaccagcgtccggac
gccatcttctgctgcaacgacatgatggccatcggcgtgctgcgcgccgccggcgaattg
cagatcgaggtgccgggcgaattgtcggtggtgggcttcgacgatatcgaactggcccag
ttcgtccatccgccgctgaccacagtggcgcagaacacccgcaagctgggcaacctgacc
gcgcagttcctgctggaacgcatcgccgaccccagcctgccggcgcgccgcgagacggta
gcgccgcaactccagctgcggggctcgaccgccccgcgcgtcaatccgacctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system