KEGG   Herbaspirillum seropedicae SmR1: Hsero_2786
Entry
Hsero_2786        CDS       T01268                                 
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase (Class II) protein
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
hse  Herbaspirillum seropedicae SmR1
Pathway
hse00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:hse00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Hsero_2786 (lysS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:hse01007]
    Hsero_2786 (lysS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hse03016]
    Hsero_2786 (lysS)
Enzymes [BR:hse01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     Hsero_2786 (lysS)
Amino acid related enzymes [BR:hse01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   Hsero_2786 (lysS)
Transfer RNA biogenesis [BR:hse03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    Hsero_2786 (lysS)
 Prokaryotic type
   Other AARSs
    Hsero_2786 (lysS)
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d
Other DBs
NCBI-ProteinID: ADJ64281
UniProt: D8IYU6
Position
3184639..3186180
AA seq 513 aa
MTTQNTPAAQPAADENSIIAERRAKLAAIREQGVAFPNDFRPANQAADLHAKYDGFENEA
LEAEPVTVTVAGRMMLKRVMGKAAFATLQDASGVRADGRIQLYITRDVTGEEAMAAFKHY
DLGDILGAEGTLFKTKTGELSVKVTKLKLITKSLRPLPDKFHGLADQEMKYRQRYVDLIM
SEETRRTFKARTAAMSSIRRFMETHGFMEVETPMLHPIPGGAAAKPFITHHNALDMQMFM
RIAPELYLKRLVVGGFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYVDYQWLMGFTEQ
VIRQAAIDAHGTAVLSYQGRELDLSKPFDRLTITGAILKYAPNYTEAQLADIDFLRTELK
KFGVKTDQAPLAGAGIGALQLALFEETAESQLWNPTYIIDYPVEVSPLARASDTVAGITE
RFELFITGREIANGFSELNDAEDQAARFHAQVAAKDAGDEEAMYYDADYIRALEYGMPPA
GGCGIGIDRLMMLITDSPNIRDVILFPHLRRED
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgaccacgcaaaacacccccgccgcccagccggcagccgacgagaacagcatcatcgcc
gagcgccgcgccaagctggcggccatccgcgaacagggcgtcgccttccccaacgacttc
cgtccggccaaccaagccgccgacctgcatgccaagtacgacggtttcgagaacgaagcc
ctggaagccgagccggtcaccgtcaccgtcgccggtcgcatgatgttgaagcgggtcatg
ggcaaggcggccttcgccaccctgcaggatgcctcgggcgtgcgcgccgatggccgcatc
cagctctacatcacccgcgacgtcaccggcgaagaagccatggccgccttcaagcactat
gacctgggcgacatcctgggcgccgaaggtacgctgttcaagaccaagaccggcgaactg
tcggtgaaggtcaccaagttgaagctcatcaccaagtcgctgcgcccgctgccggacaag
ttccacggcctggccgaccaggaaatgaagtaccgccagcgctacgtcgacctgatcatg
agcgaagagacccgccgcaccttcaaggcgcgtaccgctgcgatgtcgtcgatccgccgc
ttcatggaaacccatggcttcatggaagtggaaaccccgatgctgcacccgatcccgggc
ggcgcggcggccaagcccttcatcacccaccacaatgcgctggacatgcagatgttcatg
cgtatcgcccccgagctgtacctgaagcgcctggtggtgggcggctttgagcgcgtcttc
gagatcaaccgcaatttccgcaatgaaggtgtgtcgccgcgtcacaacccggaattcacg
atgatggagttctacgccgcctacgtggattaccagtggctgatgggcttcaccgaacag
gtgatccgccaggccgccatcgatgcgcacggcaccgccgtattgagctaccagggccgc
gagctggacctgtccaagcccttcgaccgcctgaccatcaccggcgcgatcctgaagtac
gcgcccaactacaccgaggcgcaactggccgacatcgacttcctgcgcactgaactgaag
aagttcggcgtcaagaccgaccaagccccgctggccggcgctggcatcggcgcgctgcaa
ctggcgctgttcgaagagaccgccgagtcgcagctgtggaatccgacctacatcatcgac
tacccggtcgaagtctcgccgctggcgcgcgcttccgacactgtggccggcatcaccgag
cgctttgaactcttcatcacgggtcgcgagatcgccaacggcttctccgagttgaatgac
gccgaagaccaggccgcccgcttccacgcccaggtggcggccaaggacgctggcgacgaa
gaagccatgtactacgacgccgactacatccgtgcgctggaatacggcatgccgccggct
ggtggctgcggcatcggtatcgaccgcctgatgatgctcatcaccgactcgcccaatatc
cgtgacgtgatcctgttcccgcacctgcgtcgcgaagattga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system