KEGG   Herbaspirillum seropedicae SmR1: Hsero_3277
Entry
Hsero_3277        CDS       T01268                                 
Symbol
trpS
Name
(GenBank) tryptophanyl-tRNA synthetase protein
  KO
K01867  tryptophanyl-tRNA synthetase [EC:6.1.1.2]
Organism
hse  Herbaspirillum seropedicae SmR1
Pathway
hse00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:hse00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Hsero_3277 (trpS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:hse01007]
    Hsero_3277 (trpS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hse03016]
    Hsero_3277 (trpS)
Enzymes [BR:hse01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.2  tryptophan---tRNA ligase
     Hsero_3277 (trpS)
Amino acid related enzymes [BR:hse01007]
 Aminoacyl-tRNA synthetase
  Class I (G)
   Hsero_3277 (trpS)
Transfer RNA biogenesis [BR:hse03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    Hsero_3277 (trpS)
 Prokaryotic type
    Hsero_3277 (trpS)
SSDB
Motif
Pfam: tRNA-synt_1b Mad3_BUB1_I_2
Other DBs
NCBI-ProteinID: ADJ64758
UniProt: D8J1X5
Position
complement(3754843..3756042)
AA seq 399 aa
MYPDRVVSGMRPTGALHLGHYHGALKNWVKLQSELPCLFFVADWHALTTHYDDPSVIETS
TWEMVIDWLAAGVDPAQSTLFIQSRVPEHAELHLLLSMATPLGWLERVPTYKDQQEKLAD
RDLATYGFLGYPLLQAADVLIYRASQVPVGEDQVPHIEIMREIARRFNHLYGKEKGFEEK
ALAATKKLGSKRARLYLELRTQFQEKGDDEALEQAKAMLDDAQNLSMIDRERLFGYLEGS
RKLILTEPQAMLTEASRLPGLDGAKMSKSYGNAIALREDKESVTKKVKTMPTDPQRVRRS
DPGDPDKCPVWQFHQVYSSAEVKEWAAKGCRSAGIGCLECKQPVIDAILQEQQPMLERAQ
PYLDDPSLVRAIVADGCEKARKLAQETMRDVREAMGLGY
NT seq 1200 nt   +upstreamnt  +downstreamnt
atgtatcctgaccgcgtcgtctccggcatgcgccccaccggcgcgctgcacctgggccac
tatcacggtgccctcaagaactgggtcaagctgcaatccgaattgccctgcctgttcttc
gtggccgactggcatgcgctgaccacccactacgacgatccttcggtgatcgagaccagc
acctgggagatggtcatcgactggcttgccgccggtgtcgatcctgcgcagtccacgctg
ttcatccagtcgcgcgtgcccgagcatgccgaactgcacttgctgctgtccatggccacg
ccgctgggttggctggagcgcgtgccgacctacaaggaccagcaggaaaagctggccgac
cgcgacctggccacctatggcttcctcggctatccgctcttgcaggcggccgacgtgctg
atctaccgtgccagccaggtgccggtgggcgaggaccaggtaccgcatatcgagatcatg
cgcgagattgcgcgccgctttaaccacctttacggcaaggaaaagggcttcgaggaaaag
gccctggccgccaccaagaaactgggcagcaagcgcgcccggctgtacctagaactgcgt
acgcaattccaggaaaagggcgacgacgaggcgctggagcaggccaaggccatgctcgac
gatgcccagaacctgtcgatgatcgaccgcgaacgcctgttcggctatctggagggcagc
cgcaagctgatcctcaccgagccccaggccatgctgaccgaggcgtcgcgcctgccgggg
ctggatggcgccaagatgtccaagagctacggcaacgccatcgccctgcgggaagacaag
gaatcggtgaccaagaaggtcaagaccatgcccaccgacccccaacgcgtgcgccgcagc
gatccgggcgaccccgacaaatgcccggtctggcaattccaccaggtctactcgtcggcg
gaggtcaaggaatgggccgccaagggctgccgttcggccgggattggttgcctggaatgc
aagcagcccgtcatcgacgccatcctgcaagagcagcagccgatgctggaacgcgcccag
ccctacctggacgatccttcgctggtgcgcgccatcgttgccgatggctgcgaaaaagcc
cgcaagctggcccaggaaaccatgcgcgacgtgcgcgaggccatggggctgggctattga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

Download RDF
DBGET integrated database retrieval system