KEGG   Herbaspirillum seropedicae: Hsero_3915Help
Entry
Hsero_3915        CDS       T01268                                 

Gene name
mutM
Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
hse  Herbaspirillum seropedicae
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:hse00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Hsero_3915 (mutM)
Enzymes [BR:hse01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Hsero_3915 (mutM)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Hsero_3915 (mutM)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(4479457..4480278)
Genome map
AA seq 273 aa AA seqDB search
MPELPEVEVTRRGVAPHLEGRTVSGVVMRHSGLRWPFPVGLEALLRGRVIRSTGRRGKYL
LIHFDHGTLIVHLGMSGHLRILPPGIAPQKHDHFDLEVGGQVMRMTDPRRFGAILWHDLA
DGAVEEHLLLRSLGLEPLEEKFTARELFRQTRGRSAPIKQVLLAGDIVVGVGNIYASESL
FKARIHPKTAAGKISLPRYERLAQAIRETLAAAIEQGGSSLRDFIAVNGQSGYFQQNYFV
YNRTGEACRICATPIRQIKQGQRSTFYCVSCQK
NT seq 822 nt NT seq  +upstreamnt  +downstreamnt
atgccagaattaccagaagtcgaagttacccgccgcggtgttgcacctcacctggagggg
cgtaccgtcagcggcgtcgtcatgcgccatagcggcctgcgctggccctttccggtcggc
ctggaggccttgctgcgcgggcgcgtcatccgcagcaccggtcggcgcggcaagtacctg
ctgatccatttcgaccatggcacgctcatcgtgcacctgggcatgtcgggccacctgcgc
atcctgccgccgggcatcgccccgcagaagcacgatcacttcgatctcgaagtcggcgga
caggtcatgcgcatgaccgacccgcgccgctttggggccatcctctggcacgacctggcc
gacggcgcggtggaagagcatctgctgctgcgcagcctggggctggagccgctggaagaa
aaattcactgcccgcgagctgttcaggcagacccggggccgcagcgctcccatcaagcaa
gtattgctggccggcgacatcgtggtgggcgtgggcaacatctatgcctcggaaagcctc
ttcaaggcgcgcatccatcccaagacggcggccggcaagatcagcctgccgcgctatgaa
cgcctggcccaagccatccgcgagaccctggccgccgccatcgagcagggcggcagcagc
ttgcgcgacttcattgccgtcaatggccagtcggggtatttccagcagaattacttcgtc
tacaaccgtaccggcgaagcttgccgcatctgcgccaccccgatccgacagatcaagcag
gggcagcgttccactttttattgcgtgagctgccagaaatga

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