KEGG   Haemophilus somnus 2336: HSM_0012Help
Entry
HSM_0012          CDS       T00673                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
hsm  Haemophilus somnus 2336
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:hsm00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    HSM_0012
Enzymes [BR:hsm01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     HSM_0012
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     HSM_0012
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
8734..9546
Genome map
AA seq 270 aa AA seqDB search
MPELPEVETTLKGVSPYLKGFIIEKIVVRNPKLRWEVSKELSTFKHVKILNLTRRAKYLI
IHTEQGYIIGHLGMSGSVRIVPHDNPVNKHDHFDIVMNNGKLLRYNDARRFGAWLWTNNL
SEFHLFFKLGPEPLSETFNSTYLFKKSRQKSTALKTFLMDNSVVVGVGNIYANEILFLCG
LHPQKIAKTLTKKQTEQLVFTIKQVLNEAIEQGGTTLKDFLQPDGRPGYFAQKLLVYGNK
DKPCPRCGTKIKSIIIGQRNSFFCPQCQKK
NT seq 813 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattacctgaagttgaaacaaccttaaagggcgtaagcccttatttaaaaggg
tttataattgaaaaaatagtagtacgtaatcccaaattacgctgggaagtaagtaaagaa
ctcagcacatttaaacacgttaaaattcttaacttaactcgtcgagccaagtatctcatt
atccacacggaacaaggttacattatcggacatttaggtatgtccggttcagtccgcatt
gtgccgcatgacaatcctgtcaataagcatgatcatttcgatattgttatgaacaacggc
aaattactacgctataacgatgctcgtcgctttggtgcttggctatggacgaataacctt
agtgaatttcatctttttttcaagttggggccggaacctttatctgaaacgtttaattct
acttatttgttcaaaaaatctcgtcaaaaaagcaccgcacttaaaactttcttgatggat
aattccgttgttgtaggggttggaaatatttatgcgaatgaaattttatttctatgtgga
cttcatccacaaaagatcgccaaaacattgacaaaaaaacagactgaacaacttgttttc
actattaaacaagtgcttaacgaagctattgaacaaggaggaacaaccctaaaagatttt
ttacaacctgacggtcgccccggatattttgctcaaaaacttttggtttatggaaataag
gacaagccttgtccaaggtgcggtacaaagataaaaagtattattattgggcaaagaaat
agctttttttgtccgcaatgtcaaaaaaagtga

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