KEGG   Histophilus somni 129PT: HS_0039
Entry
HS_0039           CDS       T00386                                 
Symbol
rsmB
Name
(GenBank) 16S rRNA m(5)C-967 methyltransferase
  KO
K03500  16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
Organism
hso  Histophilus somni 129PT
Brite
KEGG Orthology (KO) [BR:hso00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hso03009]
    HS_0039 (rsmB)
Enzymes [BR:hso01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     HS_0039 (rsmB)
Ribosome biogenesis [BR:hso03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    HS_0039 (rsmB)
SSDB
Motif
Pfam: Methyltr_RsmB-F NusB FtsJ Methyltransf_25 Methyltransf_31 Methyltransf_5 Methyltransf_11 Methyltransf_15 Methyltransf_12 adh_short AtzG-like
Other DBs
NCBI-ProteinID: ABI24320
UniProt: Q0I183
Position
complement(41203..42591)
AA seq 462 aa
MSKSQHNKTKRAVKSTALFTPRSVRVLAAEVILQVLVQGKSLSTLLPEQQSAVKPQDFPL
LQEICFGICRVLPRLERIIQLLLDKPLKGKTRIVHCLLLVGLYQILYTRIPAHAAVDEVV
SATKSLKSDSFRGLLNAVLRRFLREQEQILAIVDKHWQTLHPEWLVNKLKQSYANWREIV
EANNQKPPMWLRINLQHCSIADYQQLLMERGISTSTTNHPQALRLHQASAVNLLPYFEQG
WVSVQDLHAQWSALLLEPENNELILDACAAPGGKTTHILEQAPNAKVIALDIEPARLQRV
KENLVRMKQQAIIICGDATQPEQWLSEIDFNAIGLTFKSESAVQFDRILLDAPCSATGVI
RRHPDIKWLRQESDITPLVQLQGQILEALWKKLKPQGILVYATCSLLPEENSQQIQHFLT
KHNDAKLEPLPFTIGEEIGHQFVPTEQGGDGFYYAKLRKLPN
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgagcaaatctcagcacaacaaaactaaaagagcggtcaaatctaccgcacttttcacg
cctcgctcagtccgtgtgcttgcggcagaagtaattttacaagttttagttcaaggtaaa
tccctttctaccttgctgcctgagcaacaaagtgcggtcaaacctcaagattttccgcta
ctacaagaaatttgttttggtatttgtcgtgtgttacctcgcttagaacgcatcattcaa
ctcctactggataagcctttgaaaggtaaaactcggatcgtgcactgcttgttgttggtc
ggtttataccaaattttatatacccgaattcctgctcatgctgcagtggacgaagtcgtt
tctgccacgaaaagtttaaaatcagatagtttccgtggcctgttaaatgctgttttgcgt
cgctttttgcgggaacaagaacaaattctggcgatagtggataagcattggcaaacctta
catccagaatggttagtgaataaactaaaacaatcttatgccaattggcgtgaaattgtt
gaagcgaataaccaaaaacctccgatgtggctacgcattaatttacaacattgttctatt
gcggattatcaacaacttttaatggagcgaggaatatctacatcaacaacgaatcaccca
caagcattacgcctacatcaagcaagtgcggtcaatttattaccctattttgaacaagga
tgggtgagcgttcaggatctacacgcacaatggtcagccttattactcgaaccggaaaat
aacgaacttattttagacgcttgtgcggcaccgggcggaaagactacacatattttagaa
caagcacccaacgcaaaagtcatcgctttagatattgaacctgctcgtctacaacgtgtg
aaagaaaatttagttcgtatgaaacaacaagctataataatttgtggtgatgcaacccag
ccggagcaatggttatcagagattgattttaatgctataggactgacatttaaatctgaa
agtgcggtgcaatttgaccgaattttattagatgctccttgttccgctaccggtgttatt
cgtcgacaccctgatataaaatggctacgccaagaaagtgatattactcccctagtgcaa
ttgcaaggacaaattttagaagccctttggaaaaaattaaaaccacaaggtattttagtt
tatgcgacctgttctttattacctgaagagaatagtcaacaaattcagcatttcttaacc
aagcacaatgatgcaaaattagaacctttgccttttaccattggggaggaaattggtcat
caatttgttccaacagaacagggaggtgacggtttttattatgccaaattaagaaaactg
cccaattaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (32)   

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