KEGG   Harpegnathos saltator (Jerdon's jumping ant): 105181017
Entry
105181017         CDS       T03918                                 
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
hst  Harpegnathos saltator (Jerdon's jumping ant)
Pathway
hst03022  Basal transcription factors
hst03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hst00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    105181017
  09124 Replication and repair
   03420 Nucleotide excision repair
    105181017
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hst03021]
    105181017
   03400 DNA repair and recombination proteins [BR:hst03400]
    105181017
Enzymes [BR:hst01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     105181017
Transcription machinery [BR:hst03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     105181017
DNA repair and recombination proteins [BR:hst03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     105181017
SSDB
Motif
Pfam: HBB DEAD_2 Helicase_C_2 DEAD ResIII nSTAND3 AAA_11 UvrD-helicase
Other DBs
NCBI-GeneID: 105181017
NCBI-ProteinID: XP_011135765
Position
Unknown
AA seq 759 aa
MKISVDGLIVYFPYDYIYPEQYAYMLELKRGLDAKGHCLLEMPSGTGKTITLLSLIVAYM
LEYPLNVTKLIYCSRTVPEIEKVIEELKKLIDYYETETKSKPKIVGLVLSSRKNMCIHPE
VSREREGKIVDGRCHSLTASYVRERHNHDESTPICNFYEGFDMEGREQIVPPGIYSLDDL
KDYGKDRGWCPYFLARFTILHAQIVVYSYHYLLDPKIAETVSKELSKSSVVVFDEAHNID
NVCIDSMSVKINKKLMERSTNNIQLLEKTVAEMRDCDVNKLKEEYDRLVAGLRDAQLARE
TDVILANPVLPDEILEEIVPGNIRNAEHFVSFLKRFVEYLKTRLRVQHVMQESPAAFLRD
IQAKVSIERKPLRFCAQRLASLLRTMEITDMTDFSPIILVTHLATLVSTYTHGFTIIVEP
FDDKTPTVLNPILHFSCLDSSIAIKPIFDRFQSVIITSGTLSPLDMYPKILNFHPVIMSS
FTMTLARPCLLPMIVAKGNDQVAISSKYETREDVAVIRNYGQLLVEFAATVPDGLVCFFT
SYLYMESVVAAWYDQGVVDQLQRHKLLFIETQDSAETSLALINYIKACENGRGAVLLSVA
RGKVSEGVDFDHHLGRAVLMFGIPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGIMVFADKRFSRVDKRSKLPKWIQEHLTDNFCNLSTEEAIQISKRW
LRQMAQPFTRENQLGLSLLTREQLEKEETARIEEKAQQN
NT seq 2280 nt   +upstreamnt  +downstreamnt
atgaaaataagcgttgacgggttgatcgtatattttccatacgattatatttatccagag
caatatgcttatatgcttgagctcaaacgtggtttggatgccaaggggcattgcttgctg
gaaatgccttcaggtactggcaaaacaattacccttttatcactcattgtggcatacatg
ttggagtatccgttaaatgttacaaagttgatttattgttctcgaactgtaccagaaata
gagaaggttattgaagaattaaaaaaacttatagattattatgagacagaaactaagagt
aagccaaaaattgttggtttagttctgagttcacgtaaaaatatgtgcatacatcctgag
gttagtagagaacgagaaggtaaaattgtagatggtcgctgtcattctcttactgcatca
tatgtaagagagagacataatcatgatgaatctactccaatttgcaacttttatgaagga
tttgatatggaaggtagagaacaaattgttcctcctggtatttattctctggatgattta
aaggattatggaaaggatcgtggttggtgtccatatttccttgcaagatttacaatctta
catgcacagattgtagtatacagttatcattatttattggatccgaagattgcagaaact
gtttccaaagaattgagcaagagttcagtagttgtctttgatgaagctcataacattgat
aatgtctgtattgattccatgagtgtgaagataaataagaagctaatggaaaggagtacg
aataatatacagcttttggaaaaaactgtggctgagatgagagactgtgatgtgaataag
ttgaaagaggaatacgacaggctagtcgcaggtttgcgggacgctcaactcgcgagagaa
accgatgttattctggccaatcctgttcttccagacgaaatactggaagagattgtaccg
ggcaacatacgaaacgccgagcatttcgtaagtttcttgaaacgattcgtcgagtacctg
aagactcgcttgcgcgtccaacacgtcatgcaagaatcacccgcagcgttcttaagggat
atccaagcaaaagtgtccatcgagcggaaacccttgcgattttgcgcccagcgactggcg
tcccttttacgtactatggagataacagatatgacggatttttctccaatcattctggtg
acacatctcgcgacgctggtctccacgtatactcacggattcacgatcatcgtggaaccg
tttgacgacaaaacgccgaccgttttgaatcctatcttgcacttcagttgtttggattct
tcgatcgccattaagccaatatttgacagattccagtctgtgataattacttccgggacg
ctatccccattggacatgtatcccaagatactcaattttcatccagtcataatgtcgtcg
ttcactatgacattagccagaccgtgtcttctgcctatgatcgtggctaaaggcaatgat
caagtggctatttcatcgaagtatgaaacgcgagaggatgtggcagtcataagaaattat
gggcagctgttggtcgaattcgctgccacagtgccggatggtttagtctgcttcttcaca
tcgtacttgtacatggaatcggtagtagctgcgtggtacgatcaaggagtcgtggatcaa
cttcaaaggcataaactgttgttcatcgagacacaggattcagcggaaaccagtttagct
ttgatcaattacataaaggcctgtgagaatggaagaggagcggtgttgctttcagttgct
cgtggaaaagtgtccgaaggtgtcgactttgaccatcatttgggcagagctgtactcatg
ttcggcataccttacgtgtacacgcagtcgcgaatcttgaaagcgcgtttagagtacctc
agggaccagtttcaaatacgagagaatgatttcctaactttcgatgccatgaggcatgcc
gcgcaatgcgtaggacgcgcaatcagaggcaaaacggattatggtattatggtatttgcg
gataaaagattctcgagagtggataaacgaagcaaattaccgaaatggatacaagagcac
ttgaccgacaacttctgcaatttatctaccgaggaagctatacagatcagcaagagatgg
ttacggcaaatggcgcagccgttcacgcgtgagaatcagcttggactgtcgctattaaca
agagagcaactcgagaaagaagagactgccaggatcgaagagaaggcgcagcaaaattga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (22)   

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