KEGG   Harpegnathos saltator (Jerdon's jumping ant): 105189869
Entry
105189869         CDS       T03918                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
  KO
K12625  U6 snRNA-associated Sm-like protein LSm6
Organism
hst  Harpegnathos saltator (Jerdon's jumping ant)
Pathway
hst03018  RNA degradation
hst03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hst00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105189869
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105189869
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hst03019]
    105189869
   03041 Spliceosome [BR:hst03041]
    105189869
Messenger RNA biogenesis [BR:hst03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     105189869
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     105189869
Spliceosome [BR:hst03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    105189869
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 105189869
NCBI-ProteinID: XP_011150542
UniProt: E2C4F2
Position
Unknown
AA seq 79 aa
MSRKEALSQFIQQIHGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKDKYG
DAFIRGNNVLYISTQKRRN
NT seq 240 nt   +upstreamnt  +downstreamnt
atgagtcggaaagaagcattatctcaattcatacaacaaattcacgggcgacctgtcgtc
gttaaattgaacagtggtgttgactacagaggtgtattagcttgtcttgatggttatatg
aacatagcacttgaacaaacagaagaatatgttaatggacaattaaaggataaatatggt
gatgctttcattcgtggaaacaatgttttatacattagtacacaaaaacgtagaaattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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