KEGG   Halanaeroarchaeum sulfurireducens HSR2: HLASF_1087
Entry
HLASF_1087        CDS       T03927                                 
Symbol
rad2
Name
(GenBank) flap endonuclease-1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
hsu  Halanaeroarchaeum sulfurireducens HSR2
Pathway
hsu03030  DNA replication
hsu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hsu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HLASF_1087 (rad2)
   03410 Base excision repair
    HLASF_1087 (rad2)
   03450 Non-homologous end-joining
    HLASF_1087 (rad2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hsu03032]
    HLASF_1087 (rad2)
   03400 DNA repair and recombination proteins [BR:hsu03400]
    HLASF_1087 (rad2)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hsu04147]
    HLASF_1087 (rad2)
DNA replication proteins [BR:hsu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    HLASF_1087 (rad2)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     HLASF_1087 (rad2)
DNA repair and recombination proteins [BR:hsu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     HLASF_1087 (rad2)
Exosome [BR:hsu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   HLASF_1087 (rad2)
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc
Other DBs
NCBI-ProteinID: AKH97575
UniProt: A0A0F7PBP1
Position
1058082..1059065
AA seq 327 aa
MGNADLRQLAVIEEVAFDDLDGDVVAVDAHNWLYRYLTITVKFTNESVYTTEKGEEVANL
IGIVQGLPKFFENDLTPIFVFDGSVTQLKADEIEQRRDVKADAEKKMAEAKAAGDAVEAA
RFESRTQRLTDTIHETSRTLLAHLDVPYVEAPAEGEAQAAHMARTDEAVDYAGSEDYDTL
LLGAPKTLRKLTTRGAPELMDFNRTLAEHDITREQLVDVGILVGTDFNDGVTGYGPKTAL
DAIHEHGDLWAVLEAEGETIEHADEIRDLFLDPDVTDDYSVDLDPSPNLDAAKRYVTEEW
EVPMGEVDRGFERIESALTQTGLDRWT
NT seq 984 nt   +upstreamnt  +downstreamnt
atggggaacgctgacctccgtcaactggccgtcatcgaggaggtcgccttcgacgacctc
gacggtgacgtcgtcgccgtcgatgcgcacaactggctctaccggtatctcacgataacg
gtaaagttcacgaacgagtccgtctacacgaccgagaagggtgaggaagttgccaacctg
atcggcatcgtccagggcctcccgaagttcttcgaaaatgacctcaccccgattttcgtc
ttcgacgggagcgtcacgcaactcaaagccgacgagatcgaacagcgccgggatgtgaaa
gccgacgccgagaaaaagatggccgaagcgaaggcggcgggggacgctgtcgaggccgcc
cgcttcgagtcccggacacagcggttgaccgacaccattcacgagacgtcgcgcacgctg
ctagcccacctcgatgtcccctacgtcgaggcgccggccgagggcgaagcccaggcagcg
cacatggcgcgaacggacgaggccgtcgactacgccgggagtgaggactacgacacgctg
ttgctcggggcgccgaagacgttgcgaaaactcacgacgcgcggagccccggaactaatg
gacttcaaccggacgctcgcggaacacgacatcacccgggaacagctggtcgacgtcggc
atcctcgtcgggacggatttcaacgatggggtgaccggctatggaccgaagaccgcactc
gacgcgattcacgaacatggcgacctctgggccgttctcgaggccgaaggggagacgatc
gaacacgcggacgagattcgcgacctgttcttggatcccgacgttaccgacgactactcc
gtcgatctggatccgagcccgaatctcgacgccgcgaaacggtacgttaccgaggagtgg
gaggttccgatgggggaagtcgaccggggattcgaacgcatcgagtcggcgctcacccag
accggcctcgaccggtggacgtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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