KEGG   Hymenobacter swuensis: Hsw_4131
Entry
Hsw_4131          CDS       T03055                                 
Name
(GenBank) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
hsw  Hymenobacter swuensis
Brite
KEGG Orthology (KO) [BR:hsw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hsw03016]
    Hsw_4131
Enzymes [BR:hsw01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     Hsw_4131
Transfer RNA biogenesis [BR:hsw03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    Hsw_4131
 Prokaryotic type
    Hsw_4131
SSDB
Motif
Pfam: PseudoU_synth_1 DUF2344
Other DBs
NCBI-ProteinID: AHJ99726
UniProt: W8FAQ5
Position
complement(4693400..4694191)
AA seq 263 aa
MRYFLHLAYDGSAFHGWQIQPGVTTVQQELDRCLSQVLRQPVYCLGSGRTDSGVHASHQV
AHFDADLPAGLDVPTLLYRLNRALPPSIRCQVLHPVPPDAHARFSAKIRTYEYHVRLTPD
PFAANYSLYLDRAPDVAAMNEAAAMLLGTHDFTTFSKVKGAEKHYNCTCLEAGWHEEPGG
LVFRIRANRFVRGMVRLVVGTLLSVGRGKMTPQEFGEVFRSLNRVHAGGAALANGLFLCR
VEYPAELLGDAALPTGLPYFSEV
NT seq 792 nt   +upstreamnt  +downstreamnt
atgcgctacttccttcacctggcctacgacggctccgccttccacggctggcagattcag
ccgggcgtgacgaccgtacagcaggagctggaccgctgcctctcgcaggtgctgcggcag
ccggtgtactgcctgggcagtggccgcaccgattcgggcgtgcacgccagccaccaggtc
gcgcacttcgatgccgacctacccgccggtctggacgtgcccacgctgctctaccgcctc
aaccgcgcgctgccgcccagcatccgctgccaggtgctgcacccggtgccgcccgacgcc
cacgcccgcttcagcgccaaaattcggacctacgaataccacgtgcgcctcacgcccgac
ccgtttgccgccaactacagcctctacctcgaccgggcccccgatgtggcggccatgaac
gaggcggcggctatgctgctgggtacccacgattttaccacgttttccaaggtgaaaggg
gcggagaagcactataactgcacctgcctggaggccggctggcacgaggagccgggcggg
ctggtgttccgcattcgggccaaccgtttcgtgcggggcatggtgcggctggtggtgggc
acgctgctgagcgtgggccggggcaagatgacgccgcaggagttcggggaagtgtttcgc
agcctcaaccgcgtgcatgccggcggcgcggccctggccaacggcctgttcctgtgccgc
gtggaatatccggcggagctgctgggtgatgcagcgttgcccaccggtttgccgtacttc
tccgaagtgtag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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