KEGG   Haloferax volcanii: HVO_0158
Entry
HVO_0158          CDS       T01200                                 
Symbol
tbp1
Name
(GenBank) TATA-binding transcription initiation factor
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
hvo  Haloferax volcanii
Pathway
hvo03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:hvo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    HVO_0158 (tbp1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hvo03000]
    HVO_0158 (tbp1)
   03021 Transcription machinery [BR:hvo03021]
    HVO_0158 (tbp1)
Transcription factors [BR:hvo03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    HVO_0158 (tbp1)
Transcription machinery [BR:hvo03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     HVO_0158 (tbp1)
  RNA polymerase III system
    TFIIIB
     HVO_0158 (tbp1)
  RNA polymerase I system
    SL1/TIF-1B
     HVO_0158 (tbp1)
SSDB
Motif
Pfam: TBP T4bSS_IcmS DUF218
Other DBs
NCBI-ProteinID: ADE04113
UniProt: D4GZA2
Position
144786..145355
AA seq 189 aa
MTDPKDTINIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQEPKSAALIFR
SGKIVCTGAKSTDDVHESLEIVFDKLRELQIPVDDDPEITVQNIVTSADLGENLNLNAIA
IGLGLENIEYEPEQFPGLVYRLDEPSVVALLFGSGKLVITGGKQPTDAEAAVDVIISRLS
ELGLLNGSF
NT seq 570 nt   +upstreamnt  +downstreamnt
atgaccgaccccaaggacacaatcaacatcgaaaacgtcgtcgcctccacgggaatcggc
caagagctcgacctccagagcgtggcgatggacctcgagggtgccgactacgaccccgag
cagtttccgggactcgtctaccgcacgcaggagccgaagtccgcggcgctcatcttccgg
tccgggaaaatcgtctgcaccggcgcgaagtcgaccgacgacgtccacgagagcctcgaa
atcgtcttcgacaagctccgcgagcttcagattccggtcgacgacgaccccgaaatcacc
gtgcagaacatcgtcacgagcgcggacctcggcgagaacctgaacctcaacgccatcgcc
atcgggctcggtctcgaaaacatcgagtacgaaccggagcagttccccggcctcgtctat
cgcctcgacgaaccgagcgtcgtcgcgcttctcttcgggtcgggcaaactcgttatcacg
ggcggcaaacagccgacagacgccgaggcggcggtcgacgtcatcatctcgcggctctcc
gaactcggtctcctcaacgggtcgttctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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