KEGG T00375: HQ2327A

Haloquadratum walsbyi DSM 16790: HQ2327A

Entry

HQ2327A CDS T00375

Gene name

ligB

Definition

DNA ligase (ATP)

Orthology

K10747

DNA ligase 1 [EC:6.5.1.1]

Organism

hwa Haloquadratum walsbyi DSM 16790

Pathway

hwa03030	DNA replication
hwa03410	Base excision repair
hwa03420	Nucleotide excision repair
hwa03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:hwa03030]
Genetic Information Processing; Replication and repair; Base excision repair [PATH:hwa03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:hwa03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:hwa03430]

SSDB

Motif

Pfam:

DNA_ligase_A_N DNA_ligase_A_M DNA_ligase_A_C mRNA_cap_enzyme

Other DBs

NCBI-GI:

110668253

NCBI-GeneID:

4194189

UniProt:

Q18HT7

Position

complement(1573339..1575195)

AA seq 618 aa
MKYSELAEVYTDVAATSATTQKETLLADCFLDVYDNTETSLLPVTVRLVRGRVFARWEAA
EIGVSTAGAADAISKATGVESEQIETWWREEGDLGDAAAYAVDDRVQQTLTATPLTVTRV
YETLREVASYEGSGSQQKQRDEIAGLISDASPLAARYIVRTVTGSMRLGVGEGIVRNALA
SAFLDMSDDAADAVQRAIDLTNDVAVVAQRVAEQGQPGLDDVDLELFRPIKPMLAKQAES
IQTAVDELAADPKHIERNHNIELSHSGAVLIEFKYDGIRAKIHRDGDDIRVYTRRLSDVT
EQFPDVVSAARDHIDAKHYIIEAELVGYDPQSNDDTPVTFQTLAQRIQRTDNVATIAKSI
PVTTYVFDLLALNGESLLTDTLEMRLERLNTILSTKATSDSKSASTHNAHSSTSVTTVSS
DQYQSSSSLRRAQCTWATTQTTAAEFYEDALAAGHEGVMIKNPARPYQPGSRVGYQRKIK
PTMEPLDLVVTRAKWSEGRKSDFLGRPYLACRTADGNLAEVGRMHTGFTDDQLETFTNRV
EPLIENVEGREATLTPAVVLAVEYEEIQISSTYDSGYALRFPRLKQIRHDCDPSQADSLE
RVERLYEQQSLDESQTSV

NT seq 1857 nt +upstreamnt +downstreamnt
gtgaagtactctgaactcgctgaggtatatactgacgtcgctgcgacatcagcaacgacc
cagaaggagacgctcctcgctgattgtttcttagatgtctatgataataccgagacatcg
ttgcttccggttaccgttcgacttgtccggggtcgtgtattcgctcgctgggaagcagcg
gaaattggtgtttcaaccgctggtgctgcagacgcgattagtaaggcaaccggtgtcgag
agcgaacagatcgagacatggtggcgagaggagggtgaccttggtgatgctgctgcatac
gctgttgatgaccgcgtacaacagacactcactgcaacaccgctgacagtcacccgtgta
tatgagacactccgcgaggttgctagttatgaaggttcgggtagtcaacaaaaacagcga
gacgaaattgctggactcatctctgatgcatcaccactcgctgctcgatatatcgttcga
accgtaacaggatcaatgcgacttggtgttggtgaaggaatcgttcgtaatgcacttgca
agcgcatttcttgacatgtctgatgatgctgcggatgccgtccagcgagcgattgattta
accaacgatgttgctgttgtcgcgcagcgtgttgctgagcaggggcaacccgggttagat
gatgttgatcttgagttatttcgtccaattaagccaatgctcgcaaagcaagcagagagt
attcagactgcggttgatgaacttgccgcagatccgaagcacattgagagaaatcataat
atagagttatcacacagtggagcagtcctcattgagttcaaatatgatggcattcgtgct
aagatacaccgcgatggtgatgacatacgagtatatacacgacgactttctgatgtgaca
gagcagttcccggatgttgtctcagcagcacgtgatcatattgatgctaagcattatatt
attgaggcagagcttgttggatacgacccacaaagtaacgatgataccccagtcacattc
caaacgcttgcacagcgtatccaacgaaccgataacgtcgccacgattgcgaagtcgatt
ccggtcacaacatatgtctttgatttacttgccctcaacggtgaatcattgctaacggat
acgcttgagatgcggttagaacgcctcaatacaatccttagcacaaaggcgacgtcagat
agcaaatccgcctcgacacataatgctcactcttcaacgtctgttacgaccgtgagcagt
gatcaatatcaatccagctcatcactgagacgggcacagtgtacgtgggcaacaacacag
acaacagcagcggagttctatgaagatgcacttgctgctggtcatgagggtgtgatgata
aaaaatccggcgcgaccgtatcaacccgggtctcgagttggatatcagcggaaaataaag
ccaacaatggagccactcgatctggttgttacccgggcaaagtggagtgaggggcgtaaa
agtgactttctcggtcgaccgtaccttgcatgccgaactgctgatggtaatctcgcagag
gttggtcggatgcataccggattcactgatgatcaacttgagacgttcacaaaccgtgtc
gaaccattgattgaaaatgttgaagggagagaagcaacgctcacacccgctgttgtgctc
gcggttgaatatgaggaaatacagatctcatcaacatatgattctgggtatgcacttcga
tttccacgattaaaacaaatccgacatgactgtgacccatcgcaggcagactcacttgag
cgcgttgagcggttgtatgaacaacaatcactcgatgagagtcaaacgagtgtataa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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