KEGG   Haloquadratum walsbyi C23: Hqrw_1806
Entry
Hqrw_1806         CDS       T01942                                 
Symbol
tfbA4
Name
(GenBank) transcription initiation factor TFB
  KO
K03124  transcription initiation factor TFIIB
Organism
hwc  Haloquadratum walsbyi C23
Pathway
hwc03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:hwc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Hqrw_1806 (tfbA4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hwc03021]
    Hqrw_1806 (tfbA4)
Transcription machinery [BR:hwc03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     Hqrw_1806 (tfbA4)
 Prokaryotic type
  Archaeal type
    TFB
     Hqrw_1806 (tfbA4)
SSDB
Motif
Pfam: TFIIB TF_Zn_Ribbon Ribosomal_S27e Trm112p Cyclin_C Sigma70_r4 Zn_Tnp_IS1595 zinc_ribbon_5 Auto_anti-p27 CxC4 OrfB_Zn_ribbon LysW-like_globular Lar_restr_allev
Other DBs
NCBI-ProteinID: CCC39735
UniProt: G0LI15
Position
852191..853231
AA seq 346 aa
MTNNSHQSPAVTRARARRSDERTETAQQDADTTVSDETTRSAESTETVRCPECESTQLIT
DDERGETVCADCGLVVDEDSIDRGPEWRAFDSAERDQKSRVGAPTTNLMHDKGLSTNIGW
QDKDAYGNSLSSTQRQKMQRLRTWNERFRTRDSKERNLKQALGEVDRMASALGLPENVRE
TASVIYRRALDEELLPGRSIEGVATASLYAAARQAGTPRSLDEITNVSRVGRDEIARTYR
YVVRELKLQIKPADPEQYVPRFASDLDLSDEAERRARQLLRSAKEQGVHSGKSPVGLAAA
AVYAASLLINEKVTQKEVSSVANISEVTIRNRYHELLEAEEQLSTA
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgactaacaatagtcaccaatcccctgctgtcacgcgcgcacgcgcgaggaggtcagac
gaacgcacggagactgctcaacaagatgcggatacaactgtgtctgatgagacgacacgg
tctgcagaatctacagagacagtccgctgtccagaatgtgagtcgactcaacttatcaca
gatgatgaacgtggtgagacagtctgtgcagactgtggacttgttgttgatgaagattca
attgatcgtggaccagagtggcgtgctttcgatagtgctgagcgtgatcaaaagtctcgt
gttggcgccccaacgacaaatctgatgcatgataaaggcttgtcaacaaacattggctgg
caagacaaagacgcatacggaaactctttgtcatcaactcagcgacaaaagatgcagcgg
cttcgaacatggaatgagcgattccgcactcgggattcaaaggaacggaatctcaagcag
gcacttggtgaggtcgaccgaatggcatcagcgcttgggcttcctgaaaatgttcgtgaa
acggcttctgtgatttatcgtcgtgcgcttgatgaagaactactgcctggtcgatcaatt
gagggtgttgcgactgcatcgttgtatgctgctgctcgacaagctgggacgccgcgatca
cttgatgaaattacaaatgtctcacgagtgggtcgcgacgaaattgcgcgcacatatcgg
tatgtcgtgcgtgaactcaaactccaaatcaagccggctgatccagagcagtatgtgccg
cgatttgcctcggatcttgacctctcagatgaagctgaacggcgtgctcgtcaacttctt
cgtagtgcaaaagagcaaggtgtccattcggggaaatccccggttggtcttgcagcagcg
gctgtgtatgctgcatcattactcatcaatgaaaaagtaacacaaaaagaggtcagcagt
gtcgcaaatatctctgaggtaacaattcggaatcgatatcacgagctgcttgaagcggaa
gaacaactttctaccgcgtaa

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