KEGG T01942: Hqrw

Haloquadratum walsbyi C23: Hqrw_2987

Entry

Hqrw_2987 CDS T01942

Gene name

ligB2

Definition

DNA ligase (ATP) (EC:6.5.1.1)

Orthology

K10747

DNA ligase 1 [EC:6.5.1.1]

Organism

hwc Haloquadratum walsbyi C23

Pathway

hwc03030	DNA replication
hwc03410	Base excision repair
hwc03420	Nucleotide excision repair
hwc03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:hwc03030]
Genetic Information Processing; Replication and repair; Base excision repair [PATH:hwc03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:hwc03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:hwc03430]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C DUF3839

Other DBs

NCBI-GI:

385804030

NCBI-GeneID:

12447762

UniProt:

G0LLH9

Position

complement(2013789..2015645)

AA seq 618 aa
MQFDDFANHVITIEAESADLEITSLVSKLLTTAGNMDDKTLSIVVRFIKGTVFPAWSSQT
LDIGPALLHTTIAQAAGPNVDSADVENRLAEYGEIGAVAASYDLNGQQGLSAFTPSTPDS
LTVGHVDKTLRAVASASGDGSESRRRNLLFGLFSQASSSEARVLARLILGEMRIGVGTGT
VRDAIISGFIEPAADADKKTLESREDAESVPPASQPEMTNKISGDTSPNTSESVQTKESD
PDTSSNVDPSAVVERALQVSNDYGMVATIARNQGQAGLIDISLEVGRPIQAMLAQAADGV
DAVDTWDAVAIETKFDGARVQIHTDGESVSLYSRNMEDVTDPLPEIVEFISQKVTVPAIL
DAEVVAVSDDDDPLAFQEVLRRFRRKYDIDAMRESVNLNVYVFDCLHIDDADLLDIPLRE
RRERLRELFNTTDALSPFQLTTDPNVIAQARSKALSNGHEGVMLKDPDSTYNPGSRGQHW
LKHKPDVETLDLVVTGAEWGEGRRANVFGTFVVSARTTADEQQFNSLGKVATGLTDDQLT
TLTEQLRPHVRSEDGQTVMIEPAIVVEVGYEEIQRSPTYDSGFALRFPRVVGIRHDKAIS
DVDSLSRIKHLTTGESPD

NT seq 1857 nt +upstreamnt +downstreamnt
atgcagtttgatgattttgctaatcatgttattacgattgaggctgaatctgcagatcta
gagattacttcacttgttagtaaattattaacaacggctggaaacatggatgacaaaacg
ctcagtattgttgttcggtttattaaaggaacggtgtttcctgcatggtcatcacaaacc
ctcgatattggacccgcgttgttacatacgacgattgctcaggctgctggaccgaatgtt
gactcagcagatgttgaaaatcgccttgcagagtatggcgagattggggctgtcgcagcg
agttatgatctgaacgggcagcagggattgtctgcatttactccatcgacgccagattcg
ctaaccgtcggtcacgtcgataaaacgcttcgtgcagttgcatcagcaagtggtgatggg
agcgaaagccgtcgtcgtaatctgcttttcggattgttctctcaggcctcatcatcagaa
gctcgcgttcttgcacgactcatcctcggtgaaatgcgaattggtgttggaactggaact
gttcgtgatgcaattatctcagggtttatcgaaccagcggcagatgccgataagaaaaca
ctagaatctcgtgaagatgccgaatcagtgcctcctgcgtcccaaccggagatgactaat
aaaatcagcggtgacacaagcccgaatacgtctgagagtgtacaaactaaagaaagcgac
cctgatacgtcttctaatgtagatccatctgcagttgttgaacgtgcgttgcaggtatca
aatgattatggcatggttgctactattgcacgaaaccaggggcaagcaggacttatagat
atcagtcttgaagtcgggcgaccaatccaggcaatgcttgcacaagcagccgacggtgtt
gatgctgttgatacgtgggatgcggtggctattgagacgaaatttgacggagcacgagta
cagatacacacagatggcgagtcagtctcgttgtattcacgcaatatggaggatgttact
gatccgcttcccgagattgttgagtttatttctcagaaagttaccgttccagctattctt
gatgctgaggtcgtcgcggtaagcgatgatgatgacccattggcatttcaggaggtcctt
cgtcgatttcggcgaaaatacgatattgatgcaatgcgtgagtctgtcaatctcaacgta
tatgtgtttgattgtctccatatcgatgacgctgatttacttgatataccactccgtgaa
cgacgggagagacttcgtgagttattcaatacgactgatgccctctcaccattccaactc
acaactgaccccaatgtaattgcgcaagcacggagcaaagccctttcaaatggacatgag
ggtgtcatgctgaaagatcctgactcaacatacaacccaggatcccgtggacaacactgg
cttaaacacaaacccgatgttgaaacacttgatcttgttgttaccggtgccgagtggggc
gaaggtcggcgtgcaaatgtgtttggaacgtttgttgtttctgcacgaacaacagcagat
gaacagcaatttaattcactcgggaaagttgcaacaggactcacagatgaccaacttaca
accctaactgagcaattgcgcccacatgttcgctcagaagatggacagaccgtcatgatt
gaacccgcaattgttgttgaagttggatatgaggagattcaacgctcaccgacgtatgac
tctggatttgccctccggtttccgcgtgttgttggaatccgacatgacaaagcaatcagc
gacgttgattcactttctcgaatcaaacatctcaccacaggcgagtcacctgattag

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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