KEGG   Halopiger xanaduensis: Halxa_2747
Entry
Halxa_2747        CDS       T01532                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
  KO
K03660  N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
Organism
hxa  Halopiger xanaduensis
Pathway
hxa03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hxa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Halxa_2747
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hxa03400]
    Halxa_2747
Enzymes [BR:hxa01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Halxa_2747
DNA repair and recombination proteins [BR:hxa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Halxa_2747
SSDB
Motif
Pfam: HhH-GPD OGG_N AlkA_N
Other DBs
NCBI-ProteinID: AEH37363
UniProt: F8D368
Position
2071755..2072636
AA seq 293 aa
METGTIPLADLAGGMDLYRTLESGQTYLWRREDGEMYRTEPAPGTWYSTVVDGEVIRVRT
ADGRLEWQSTTDAEPTVRRLLRLDDDLEAIVDAAPDDPLLREAYEAHRGMRLVTDPAFGC
LISFICSAQMRVSRIHGMVSTLAREYGTPLDVDGRTYYAFPTPEQLATATEAELRELGLG
YRAPYVVRTAEMVADGEAHPAEARNLEYEAARDYLCQFVGVGDKVADCVLLFSLGFDEAV
PLDTWIKSAIEDYYPDCDRGSYAATSRAIRDRLGGEYAGYAQTYIFHHLRTGE
NT seq 882 nt   +upstreamnt  +downstreamnt
atggaaacgggaacgatcccgctcgcggacctcgccggcggtatggacctgtaccgaacc
ctcgagagcggccagacctacctctggcgccgcgaggacggcgagatgtatcgcacggaa
ccggcgccgggtacgtggtactccaccgtcgtcgacggggaggtgatccgcgtccgcacc
gccgacggccgcctcgagtggcaatcgacgaccgacgccgaaccgaccgtgcgccgactg
ctgcgcctcgacgacgacctcgaggcgatcgtcgacgctgcgccggacgatccgttgctg
cgagaggcctacgaggctcaccgcgggatgcgactcgttacggatccggccttcggctgt
ctgatctcgtttatctgctcggcgcagatgcgggtcagccgcatccacgggatggtctcg
acgctggcgcgggaatacggcacgccgctcgacgtcgacggccgaacctactacgcgttc
ccgacccccgagcaactcgcgacggcgaccgaagccgaactccgcgagttgggactgggc
taccgggcgccctacgtcgtccggacggccgagatggtcgccgacggcgaggcccacccg
gccgaggcgcgcaacctcgagtacgaggccgcccgggactacctctgtcagttcgtcggc
gtcggggacaaggtcgccgactgtgtgttgctgttctcgctgggattcgacgaggccgtg
ccgctggacacctggatcaagtcggccatcgaggactactatccggactgtgaccggggt
tcctacgcggcgacctcgcgggccatccgcgatcgactcggcggggagtatgccggctac
gcccagacgtacattttccaccacctccggaccggcgagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

Download RDF
DBGET integrated database retrieval system