KEGG   Hydrogenobaculum sp. Y04AAS1: HY04AAS1_0143
Entry
HY04AAS1_0143     CDS       T00745                                 
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
hya  Hydrogenobaculum sp. Y04AAS1
Pathway
hya03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hya00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HY04AAS1_0143
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hya03019]
    HY04AAS1_0143
   03016 Transfer RNA biogenesis [BR:hya03016]
    HY04AAS1_0143
Enzymes [BR:hya01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     HY04AAS1_0143
Messenger RNA biogenesis [BR:hya03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     HY04AAS1_0143
Transfer RNA biogenesis [BR:hya03016]
 Prokaryotic type
  tRNA degradation factors
   HY04AAS1_0143
SSDB
Motif
Pfam: RNase_PH RNase_PH_C PNPase S1 KH_1 KH_2 TUG-UBL1
Other DBs
NCBI-ProteinID: ACG56835
UniProt: B4U6R7
Position
127391..129502
AA seq 703 aa
MIVKAEIGNQDPIYIEANKYAHQADSSILISQGGTKVLVTVCVSEEPLCGIDFAPLSVDY
RERSFAWGKIPGGFIKREGKPTDREVLISRVIDRPLRPLMPKGFLNEVVVTCLTLSADDK
YDPDVLAITGASAALVSSSVPFEGPIAGMRVCRVNGEFIINPTYEQRKNSDMDIVMALSK
DAIVMVEGGAKEVEESVLLDALFFGLEKGQTLIKAQEELVDSLKPEKKPIGHIGLSDDMA
NKLKEIASSKILEAFSIEDKKERSKALKDVYAQAMQKLGISKEQEFDFLVSFKDLESQLM
REQILKYKKRIDGRKETDIRPITIEMHPLERPHGSAVFTRGQTQALATVTLAPKDEAQLV
ETIFEGETFKRFMLHYNFPPFSTGEARPWGPPRRREIGHGALAERALEPLLAKEEDFPYI
IRVVSDILESNGSSSMATVCAGSLALFDAGVPMKKHVAGIAMGLIKDGDNFVILTDILGD
EDHLGDMDFKVAGTRDGVTSVQMDIKIKGLSKDIMIKALNQAKEARMFILDKLYEAIPEP
NKEVSKYAPKAQVMKIPEDKVGLVIGPAGKNIKYIKEQFGASVWIDGANAYINAPTIEAV
NKAADFINSLIQEVEVGGVYEGKVIRVENYGLFVEVLPGKVGLLHASAMTEKPTINVGDT
IKVKVMAIDEQNRLNLCSPDYQKPENQERPRKEQLNRKPHHRK
NT seq 2112 nt   +upstreamnt  +downstreamnt
atgattgtaaaagctgaaattggaaatcaagaccctatatatatagaagcaaacaagtat
gcccatcaagctgatagcagcattcttatatctcaaggtggtacaaaggtattggttact
gtatgtgtatcagaagagcctctatgtggcatagattttgcacctttatcagtagattac
agagagcgctcttttgcttggggtaaaataccaggagggtttataaaaagagagggaaaa
cctacagatagagaagtgcttatctcaagggtgatagatagacctcttagacctctcatg
cccaaaggatttttaaatgaggtggtggttacttgtctaacgctttcagccgatgacaaa
tacgatcctgacgtgttagccatcacaggtgcttctgctgcgctcgtttcttcctctgtg
ccttttgaagggcctatagctggcatgagggtttgcagagtaaacggagaatttataata
aaccccacctatgaacagcgcaaaaacagcgatatggatatcgttatggctctttcaaaa
gatgcgatagtgatggtggaaggcggggcaaaagaagtagaagaaagtgttcttttggat
gctttattttttggacttgaaaaaggacaaacccttataaaggcccaagaagagcttgtg
gattctttaaaaccagagaaaaaacccataggtcacatcggtttatcagatgatatggcg
aataagctaaaagaaattgcttcttcaaagattttagaagcttttagtatagaagataaa
aaagaaagatctaaagctttaaaagatgtttatgctcaagcaatgcaaaaattggggata
tcaaaagaacaagagtttgactttttagtatcttttaaagatttagaaagccaacttatg
agggagcaaatcctaaaatataaaaagcgcatagatggtagaaaggaaacagatataagg
ccaattaccatagaaatgcatccactcgaaagaccacatgggtctgctgttttcactaga
ggtcaaactcaagctttagctacagtgactttggcaccaaaagatgaagctcagcttgtg
gaaacaatatttgaaggtgagacttttaaaagatttatgcttcattacaacttcccacct
tttagcacaggtgaagcgaggccttggggtcctccaagaagaagggagataggccacggt
gctttggcggaaagagctttagagcctcttttagcgaaagaagaggatttcccttacatt
ataagagtagtttcagatattttagaatcaaacggctcaagctctatggctacagtgtgc
gcaggttctttggcactttttgatgctggtgtacccatgaaaaagcatgtagccggcata
gctatgggtcttataaaagatggcgataactttgtcatacttaccgatatacttggagat
gaagaccatcttggagatatggatttcaaggtagctggtacaagggatggagtaacaagc
gttcaaatggatataaaaataaaaggtcttagcaaagatataatgataaaagctttaaac
caagccaaagaagcaaggatgtttatattggataaactttatgaagctataccagaacca
aacaaagaagtatctaaatatgctccaaaagctcaagtgatgaaaattccagaggacaaa
gtgggtcttgtaataggccctgctggaaagaatataaagtatataaaagagcaatttggt
gcaagtgtatggatagatggtgctaacgcttatataaatgcacctactatagaagccgta
aataaggcggcagattttataaactctttaattcaagaggtagaggtaggtggcgtatat
gaaggcaaagtaataagggtagaaaactatggtttgtttgtagaagtactacctggcaaa
gtaggattgctacatgcgtctgctatgactgaaaagcctactataaacgttggtgatact
ataaaagtaaaagttatggctatagacgaacaaaataggttaaacctctgtagtccagac
tatcaaaagccagaaaaccaagaaagaccacgaaaagaacaacttaataggaaaccccat
cacagaaaatag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (7)   
   Pfam (7)   
All databases (27)   

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