KEGG   Hymenobacter sp. DG25B: PK28_01810
Entry
PK28_01810        CDS       T03500                                 
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
hyd  Hymenobacter sp. DG25B
Pathway
hyd03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hyd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    PK28_01810
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hyd03400]
    PK28_01810
Enzymes [BR:hyd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     PK28_01810
DNA repair and recombination proteins [BR:hyd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     PK28_01810
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: AIZ64942
UniProt: A0A0A7LTE3
Position
404438..405205
AA seq 255 aa
MKILSYNVNGLRSALSKGLLDWVQQTDPDVLCLQEIKAGREPLDVSGFEALGYHVYQHPA
EKPGYSGVATFSKQKPKNVATGCEIPLYDCEGRVLRLDFEDYSVLNVYMPSGTSGPERQS
FKLEWLRFFRHYVAQLRAAGTPPLVIAGDFNCCQQGLDLHNPKANQNSPGFTPEERAWFA
AFLADGFTDSFRHVHGDAPGHYSWWTYRSGARARNVGWRLDHLLVDQALQPRISGAGLLT
DAVHSDHCPALVELQ
NT seq 768 nt   +upstreamnt  +downstreamnt
ttgaaaattctctcttacaacgtcaacgggctgcgctcggccctcagcaagggcctactg
gattgggtgcagcaaaccgacccggacgtactgtgcctgcaggaaattaaggccgggcgc
gagccactggatgtgtcggggtttgaagcgctgggttaccacgtgtatcagcacccggcc
gaaaagcctggctacagcggcgtggctaccttcagcaagcaaaagcccaagaacgtggct
accggctgcgaaatcccgctctacgactgcgaggggcgcgtattgcgcctggatttcgag
gattactcagtactgaacgtgtacatgccctcgggcaccagcgggccggagcgacagtcg
tttaagttggagtggttgcggttcttccgccattacgtagcacagttgcgcgctgccggc
acgcccccgctggttattgccggcgactttaactgctgccaacagggcctagacctgcac
aaccccaaagccaaccagaacagccccggcttcacgcccgaagagcgggcctggtttgcc
gcgtttttggccgatggcttcaccgactccttccgccacgtgcacggcgacgccccgggc
cattattcctggtggacgtaccgcagcggcgcccgcgcccgcaacgtaggctggcgtctg
gatcatttattagtagatcaggcgctgcaaccgcgcatcagcggagcgggtctgttgact
gatgcggtgcattccgaccactgcccggcgctggtagagctgcagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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