KEGG   Hymenobacter sp. DG25B: PK28_03915
Entry
PK28_03915        CDS       T03500                                 
Name
(GenBank) endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
hyd  Hymenobacter sp. DG25B
Pathway
hyd03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hyd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    PK28_03915
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hyd03400]
    PK28_03915
Enzymes [BR:hyd01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     PK28_03915
DNA repair and recombination proteins [BR:hyd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     PK28_03915
 Prokaryotic type
     PK28_03915
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S RecR_HhH HHH_5 Cdd1 HHH_8 DUF2400
Other DBs
NCBI-ProteinID: AIZ63052
UniProt: A0A0A7LN61
Position
complement(906107..906811)
AA seq 234 aa
MRKTERYRRFLDYFTTHFPAPETELHYCSPYELIVAVVLSAQCTDKRVNLVTPALFEQFP
TPAHLAAASVEEIFPFIRSVSYPNNKAKHLAGLGRLLVQDFNSEVPSQLEDLQRLPGVGR
KTANVVMSVIYNQPAMAVDTHVFRVSHRLGLVSKTATTPLAVEKELVRYIPEELVNKAHH
WLILHGRYICVARQPKCGICPLTDICAYYQKVVKPTAALGLNTAQQLENEGTVE
NT seq 705 nt   +upstreamnt  +downstreamnt
atgcgtaagaccgagcggtaccgccgctttctggactacttcaccacccactttcctgcc
cccgaaaccgagctgcactactgcagcccgtacgagctgattgtggccgtggtgctcagt
gcccaatgcactgacaaacgcgtgaacctggtcacgccggctctttttgagcagttcccc
acgccggcgcatctggcggctgcctctgtggaggaaattttccctttcattcggagtgtc
tcctaccccaacaacaaagccaaacacctggccgggctggggcgcctgctggtgcaggat
ttcaattccgaggtacccagtcagctggaagatctgcagcgcctgcctggcgtgggccgc
aaaacggccaatgtggttatgtccgtgatttacaaccagcccgctatggccgtggatacg
cacgtctttcgggtgtcgcatcggttgggcctggttagcaaaacggccactaccccgctg
gccgtagagaaagagctggtgcggtatattccggaagagttggtgaacaaagcacaccac
tggctgatcctgcacgggcgctacatctgcgtggcacgccaacctaaatgcggcatctgt
ccactcacggacatttgcgcctattaccagaaggtagtaaagcctactgccgcgcttgga
ctgaacaccgctcagcagctggaaaacgagggaaccgtcgaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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