KEGG   Hymenobacter sp. DG25B: PK28_08705
Entry
PK28_08705        CDS       T03500                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
hyd  Hymenobacter sp. DG25B
Brite
KEGG Orthology (KO) [BR:hyd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hyd03032]
    PK28_08705 (gyrB)
   03400 DNA repair and recombination proteins [BR:hyd03400]
    PK28_08705 (gyrB)
Enzymes [BR:hyd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     PK28_08705 (gyrB)
DNA replication proteins [BR:hyd03032]
 Prokaryotic type
  DNA Topoisomerases
   PK28_08705 (gyrB)
DNA repair and recombination proteins [BR:hyd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      PK28_08705 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3 GyrB_hook Leg1
Other DBs
NCBI-ProteinID: AIZ63753
UniProt: A0A0A7LMY8
Position
2048490..2050466
AA seq 658 aa
MSETKEKKGPAEYSADSIQVLEGLEAVRKRPSMYIGDTGVKGLHHLVWEVVDNSIDEALA
GHCDRIEVTINENNSITVRDNGRGIPVDFHQKEGRSALEVVMTVLHAGGKFDKDSYKVSG
GLHGVGVSCVNALSKDLKVIVRRNGHIYEQDYKIGVPQYPVKQIGDTDEHGTQVEFMPDD
TIFSESVYKYETIANRLRELSYLNKGIRILLTDRRETNDDDTFLHEEFYSVGGLSEFVQY
LDNSRNVLMPAPIHVISEKGGTPVEVALEYNDSYQEHIFSYVNNINTIEGGTHVAGFRSA
LTRTLKAYADKSGLLEKAKVEVQGDDFREGLTAVISVKVQEPQFEGQTKTKLGNSDVSGA
VNQAVGEILNQYLEENPKEARIIVEKVILAAKARVAARKAREMVQRKSVLGSTSLPGKLA
DCSESDPAICELYLVEGDSAGGTAKQGRNRAFQAILPLRGKILNVEKAQEHRIYENEEIR
NMITALGVSFEKKTDEDDGSSVRSLNLDKLRYHKIVIMTDADIDGSHIRTLILTFFFRYM
RELIDNGYIYIALPPLYLVKRGKEERYCWTEEERVAAQEELGRGKPETVNVQRYKGLGEM
NAEQLWTTTMQPETRSLKRVDVESGVEADHLFSMLMGDEVPPRREFIEKNAKYAKLDV
NT seq 1977 nt   +upstreamnt  +downstreamnt
atgagcgaaacgaaagagaaaaaaggccccgccgagtactccgcggatagcattcaagta
ctcgaagggctcgaggccgtacggaaacggccgtccatgtacattggcgataccggcgtc
aagggcctgcaccatctggtgtgggaagtagtcgataactccatcgatgaagccctggcc
ggccactgtgaccggattgaagtaaccatcaacgaaaacaactccattaccgtccgcgac
aacggccgcggcattcccgttgactttcaccagaaagaaggccgctcggccctggaggta
gtaatgacggtgctgcacgccggtggtaagttcgataaggactcttacaaggtgtccggc
ggcttgcacggcgtaggcgtgagctgcgtaaacgcgctcagcaaagacctgaaagtaatt
gtgcgccgtaacggccacatttacgaacaggattataaaatcggcgtgcctcagtacccg
gtaaagcaaatcggtgacaccgatgagcatggtacccaggtagagtttatgcccgatgat
accatcttcagcgagagtgtgtacaagtacgaaaccattgctaaccgtttgcgggagctg
tcgtacctgaacaaaggcatccgcatcctgctgacggaccgccgtgagaccaacgatgat
gacacgttcctgcacgaagagttttactccgtaggcggcctgagcgagtttgtgcagtac
ctcgacaacagccgcaacgtgctgatgccggcacccattcacgtgataagcgagaaaggc
ggtacgcccgtagaagtagccctggagtacaacgactcctaccaagagcacatcttcagc
tacgtaaacaacatcaacaccattgaaggtggtacgcacgtagccggtttccgctcggcc
cttacccgtacgctgaaagcctacgccgataaatccggtttgctggaaaaggccaaggta
gaggtacagggtgatgacttccgtgaaggcctcaccgccgttatttcggtgaaggtgcag
gagccccagttcgaaggccagaccaaaaccaagctgggcaactccgatgtgagcggcgcc
gtgaaccaggccgtgggcgaaatcctgaaccagtatctggaggaaaaccccaaagaggcc
cgcattattgtggagaaggtaattctggctgctaaggcccgtgttgccgcccgcaaagcc
cgcgagatggtgcagcgtaaatcagtgctgggctctaccagtctgcccggtaagctggcc
gactgctcggaatccgaccccgctatctgcgagctgtatctggtagaaggtgactccgcc
ggtggcactgccaagcagggccgtaaccgcgctttccaagccattttgccgctgcggggt
aaaatcctgaacgtggaaaaagcccaggagcaccgcatctacgaaaacgaggaaatccgg
aacatgattacggccctcggtgtgagcttcgaaaagaagaccgatgaggatgatggtagc
agcgtacgtagcctaaacctggacaagctgcgctaccacaaaatcgtcatcatgaccgac
gccgacatcgacggctcgcacatccggacgctgattctgacgttcttcttccgctacatg
cgggagctgattgataatggctacatctacattgccctaccgcccctgtacctggtaaag
cggggcaaagaggagcgctactgctggacggaagaggagcgtgtcgctgctcaggaagag
ctgggccgcggcaagcccgaaacggtgaacgtgcagcgctacaaaggcttgggtgagatg
aacgccgagcagctctggacaacgaccatgcagcccgaaacccgctcgttgaagcgtgtg
gacgtggagtctggcgtggaagctgaccacctgttctccatgctgatgggcgacgaagtg
ccgccccgccgcgagttcatcgagaaaaacgccaaatacgccaagctggatgtataa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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