KEGG   Hydrogenophaga crassostreae: LPB072_05260
Entry
LPB072_05260      CDS       T04505                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
hyl  Hydrogenophaga crassostreae
Pathway
hyl03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:hyl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    LPB072_05260
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hyl03021]
    LPB072_05260
   03400 DNA repair and recombination proteins [BR:hyl03400]
    LPB072_05260
Enzymes [BR:hyl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     LPB072_05260
Transcription machinery [BR:hyl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     LPB072_05260
DNA repair and recombination proteins [BR:hyl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      LPB072_05260
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AOW12351
UniProt: A0A167I9Q7
Position
complement(1103717..1103920)
AA seq 67 aa
MARITVEDCLEKIPNRFQLVLAATYRARMLSQGHAPKIESKNKPGVTALREIAEGKVGIE
MLKKVPL
NT seq 204 nt   +upstreamnt  +downstreamnt
atggcacgcattaccgtcgaagactgcctggaaaaaatccccaaccgctttcagcttgtg
ctggcagcaacctaccgcgctcgtatgctgagccagggccacgcacccaagatcgaaagc
aagaacaagccgggtgtgaccgctttgcgcgaaatcgctgaaggcaaagtcggcatcgaa
atgctcaaaaaagtgccgctctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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