KEGG   Hymenobacter sp. APR13: N008_11080
Entry
N008_11080        CDS       T03213                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
hym  Hymenobacter sp. APR13
Pathway
hym03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hym00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    N008_11080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hym03400]
    N008_11080
DNA repair and recombination proteins [BR:hym03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     N008_11080
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      N008_11080
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 AAA_22 AAA_16 Kinesin AAA_5 LAGLIDADG_3 AAA
Other DBs
NCBI-ProteinID: AII52516
UniProt: A0A076HSE6
Position
2609259..2611295
AA seq 678 aa
MKYQLTSEFQPTGDQPKAIAQLVQGVNNGEPAQVLLGATGTGKTFTMANVIAETGKPALV
LCHNKTLAAQLYGEFKQFFPNNAVEYYISYYDYYQPEAYIASSDVFIEKDLAINQEIEKL
RLHTTSTLLSGRRDVIVIASVSCIYGIGNPEEFSKNVIYLAPGLKYSRNNLLYQFVQILY
SRTEMEFTRGTFRVKGDTVDVYPAYADHAYRLFFFGDEIEAIHKIDPQSGKKLADEKSVT
LYPAQLFVTGKDTLNQAIKEIQFDLVQQHAYFEKEGRDSEAKRIMERTEFDLEMIRELGY
CSGIENYSRYFDGRQPGTRPFCLLDYFPDDFLLVVDESHATMPQIRAMWGGDRSRKTALI
EYGFRLPSAFDNRPLTFNEFESMYRQAVYVSATPADYELTQANGVVVEQIIRPTGLLDPE
IDLRPSVNQIDDLLDEVDNRVKMGDRVLVTTLTKRMAEELQKYMERLGIKSSYVHSDVKT
LDRVEILRQLRLGEIDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRDQRSLIQTMGRA
ARNDRGKVIMYADRMTGSMQRAIDETNRRRATQLAYNQEHGITPRTVRKSREAIMEQTSL
SDYRIQEGTAYVGPEADGGLAIAAEPVVAMMGRTDLEKLIKQTEKQMEAAAKDLDFLTAA
KLRDELAALKQVLKTKRE
NT seq 2037 nt   +upstreamnt  +downstreamnt
atgaagtatcaactcacctcggaattccagcccaccggcgaccagcccaaagccattgcc
caactggtgcagggcgtgaacaacggcgagccggcgcaggtgctgctgggcgccaccggc
acgggcaaaaccttcaccatggccaacgtcattgccgagaccggcaagccggccctggtg
ctgtgccacaacaaaaccctggccgcccagctctacggcgagttcaagcagttcttcccc
aacaacgccgtcgagtactacatcagctactacgactactaccagcccgaagcctacatt
gccagctccgacgtcttcatcgagaaggacctggccatcaaccaggaaatcgagaagctg
cggctgcacaccacgtccacgctgctctcgggccgccgcgacgtgattgtaattgcctcg
gtgtcgtgcatctacggcatcggcaaccccgaggagttcagcaaaaacgtcatttatctg
gctcccggcctgaaatactcgcgcaacaacctgctctaccagtttgtgcagatcctgtac
tcgcgcaccgaaatggagttcacgcgcggcacgttccgggtgaaaggcgacaccgtggac
gtgtatccggcctacgccgaccacgcctaccggctgttcttcttcggcgacgaaatcgag
gccatccacaaaattgacccgcagagcggcaagaagctggccgacgagaaatcggtgacc
ttgtacccggcccaattgttcgtgaccggcaaagacacgctcaaccaggccatcaaggaa
atccagttcgacctcgtgcagcagcacgcctacttcgagaaggagggccgcgactccgaa
gccaagcgcatcatggagcgcaccgagttcgacctggagatgattcgggagctgggctac
tgctcgggcattgagaactactcgcgttacttcgacggccgccagcccggcacccggccc
ttctgcctgctcgactacttccccgacgacttcctgctggtagtagacgaaagccacgcc
accatgccccagatccgggccatgtggggcggcgaccggagccgcaaaacggccctcatc
gagtacggctttcgcctgccatcggctttcgacaaccgtccgcttacgttcaacgagttt
gagagcatgtaccggcaggcggtgtacgtgagtgccacgcccgccgactacgagctcacc
caggccaatggcgtggtggtggagcagatcatccggcccaccggcctgctcgaccccgaa
atcgacctgcggcccagcgtcaaccagatcgacgacctgctggacgaggtggacaaccgc
gtgaagatgggcgaccgggtgctggtgacgacccttactaagcgcatggccgaggaactg
cagaagtacatggagcgcctgggtattaagtccagctacgtgcactctgatgtgaaaacc
ctggaccgggtggaaatcctgcgccagctgcgcctcggcgaaatcgacgtgctcatcggc
gtgaacctgctccgtgaaggcctcgacctgcccgaagtgagcctggtagccatcttggat
gccgataaggaaggcttcctgcgcgaccagcgcagcctgatccagaccatgggccgcgcc
gcccgaaacgaccggggtaaggtgattatgtacgccgaccgcatgaccggctctatgcag
cgcgccatcgacgaaaccaaccgccgccgcgccacccagctggcctacaaccaggaacac
ggcatcacgccgcgcaccgtgcgcaagagccgcgaggccatcatggagcagacttcgctg
tcggactaccgcattcaggagggcacggcctacgtgggtcccgaggccgacggcggactg
gccattgccgccgagccggtagtagccatgatgggccgcaccgacctggaaaagctcatc
aagcaaaccgaaaagcaaatggaagccgccgctaaggacctggacttcctcaccgccgcc
aagcttcgcgacgagttggccgccctcaagcaggtgctcaaaacaaagcgcgaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (21)   

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