KEGG   Hydrogenophaga sp. RAC07: BSY239_1589
Entry
BSY239_1589       CDS       T04455                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
hyr  Hydrogenophaga sp. RAC07
Pathway
hyr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hyr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BSY239_1589 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hyr03021]
    BSY239_1589 (rho)
   03019 Messenger RNA biogenesis [BR:hyr03019]
    BSY239_1589 (rho)
Transcription machinery [BR:hyr03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     BSY239_1589 (rho)
Messenger RNA biogenesis [BR:hyr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     BSY239_1589 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT OB_RNB AAA_25 Spore_III_AA ATPase_2 ResIII AAA AAA_19
Other DBs
NCBI-ProteinID: AOF86128
UniProt: A0A1B3LZ42
Position
complement(1678144..1679406)
AA seq 420 aa
MHLNELKALHVSEVLKQAEALEIENTGRMRKQELMFAIIKKRAKGGELVYADGVLEVLPD
GFGFLRAPDTSYTASTDDIYISPSQIRRFNLHTGDMIEGEVRIPKDGERYFALNKLDKIN
GLPPEDNKHKIMFENLTPLFPKEQMRLERDIKSEENITGRVIDIIAPIGRGQRALIVAPP
KSGKTVMMQHICHAISANHPEVVLMVLLVDERPEEVTEMQRTVRGEVIASTFDEPAARHV
HVAEMVIERAKRLVELGKDVVIMLDSITRLARAYNNVLPSSGKVLTGGVDANALQRPKRF
FGAARKIEEGGSLTIIATALVDTGSRMDEVIFEEFKGTGNCEIHLDRRLYEKRVFPSIQL
NRSGTRREELLLQPEILQKTRILRQFMYNMDEIEAMEMVLKSMKSTKNNSEFFDMMRRGG
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgcacctcaacgaactcaaggcactgcacgtgtctgaagtcctcaagcaggctgaagcg
cttgagatcgaaaacaccggccgcatgcgcaagcaggagctgatgttcgccatcatcaaa
aagcgcgccaagggcggcgagctggtgtacgccgacggtgtgctcgaagtgctgcccgac
ggcttcggtttcctgcgtgcacccgataccagttacaccgccagcaccgacgacatctac
atctcgcccagccagatccgccgcttcaacctgcacaccggcgacatgatcgagggcgag
gttcgcattcccaaggacggcgagcgctacttcgcgctcaacaagcttgacaagatcaac
ggcctgcctcccgaggacaacaagcacaagatcatgttcgagaacctgacgccgctgttc
cccaaggaacagatgcgcctggaacgcgacatcaagagcgaagagaacatcacgggccgt
gtcatcgacatcattgcgcccatcggccgtggtcagcgcgcgctgatcgtggcgccgccc
aagagcggcaagacggtcatgatgcagcacatctgccatgccatttccgccaaccacccc
gaggtggtgctcatggtgctgctggtggacgagcgcccggaagaagtgaccgagatgcag
cgcaccgtgcgcggcgaggtcatcgcctccacgttcgacgaacccgcggcgcgccacgtg
cacgtggccgagatggtgatcgagcgcgccaagcgcctggtcgaactcggcaaggacgtg
gtgatcatgctcgactccatcacccgcctggcccgcgcctacaacaacgtgctgccctcc
agcggcaaggtgctcaccggcggtgtggacgccaacgcgctgcagcgccccaagcgcttc
tttggtgcggcccgcaagatcgaggaaggtggctcgctcaccatcatcgccaccgcgctg
gtggacaccggctcgcgcatggacgaggtgatctttgaagagttcaagggcaccggcaac
tgcgagatccacctggaccgccgcctgtacgagaaacgcgtgttcccctcgatccagctc
aaccgcagcggcacccgtcgcgaagagttgttgctgcagcccgagatcctgcaaaagacc
cgaatcctgcgccagttcatgtacaacatggacgaaatcgaggcgatggagatggtgctc
aagagcatgaaatccaccaaaaacaattccgaattcttcgacatgatgcgtcggggcggc
tga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (23)   

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