KEGG   Hydrogenobaculum sp. SN: HydSN_0212
Entry
HydSN_0212        CDS       T02516                                 
Name
(GenBank) hypothetical protein
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
hys  Hydrogenobaculum sp. SN
Pathway
hys03030  DNA replication
hys03430  Mismatch repair
hys03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hys00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HydSN_0212
   03430 Mismatch repair
    HydSN_0212
   03440 Homologous recombination
    HydSN_0212
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hys03032]
    HydSN_0212
   03400 DNA repair and recombination proteins [BR:hys03400]
    HydSN_0212
Enzymes [BR:hys01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HydSN_0212
DNA replication proteins [BR:hys03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HydSN_0212
DNA repair and recombination proteins [BR:hys03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HydSN_0212
SSDB
Motif
Pfam: DNA_pol3_delta2 Picorna_P3A
Other DBs
NCBI-ProteinID: AGH92842
Position
complement(179073..179813)
AA seq 246 aa
MNAKEFLEKAQLNQRIPTSTLIVSIEKDVEKLALSYAKGILCENKQPWGCKECYSCKIFY
EKHPDFIWIGKENSIKIDDVREISNFANLKPNYSTNKVCLITNAQNMLKEASNALLKTLE
EPPSYLKFIITADSLSNIIPTIVSRSVVLELFERKTSKHPLCEKLISKRFYETIPQIDNI
KDIKEKEELIDCLVEKLEQHMLKIGFNEDIDKAIKSLNTTKRALSRGIRLSLWISAILSP
IIDEQL
NT seq 741 nt   +upstreamnt  +downstreamnt
atgaacgcaaaagaatttttagaaaaagcccagctaaaccaaagaatacctacctctacc
cttattgtatctatagaaaaagatgtagaaaaactagccctctcttatgcaaaggggatt
ctctgtgaaaacaagcaaccatggggatgcaaagagtgttatagttgcaagatattttat
gaaaagcatccagattttatatggataggaaaagaaaactctataaagatagacgatgta
agagaaatatcaaattttgccaacctaaaaccaaactatagtacaaacaaagtatgtctt
ataacaaacgcccaaaacatgttaaaagaagcctcaaacgcccttttgaaaaccttagaa
gaaccgccttcttacctaaaatttatcatcacagcggactctttatcaaacataatacct
acgatagtatcaagatccgtcgttttagagctttttgaaagaaaaacttcaaaacatcct
ctatgtgagaagcttatctcaaaacgcttttacgaaacaatcccccagatagacaacata
aaagatattaaagaaaaggaagagcttatagactgtctagtagaaaaactagagcaacac
atgttaaaaattggcttcaacgaagatatagacaaagctattaaaagcctaaacaccacc
aaaagagcactttcaagaggcataagactaagcctttggattagtgctatattaagccct
ataatagatgagcaattataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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