KEGG   Hydrogenobaculum sp. SN: HydSN_1643
Entry
HydSN_1643        CDS       T02516                                 
Name
(GenBank) DNA gyrase, B subunit
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
hys  Hydrogenobaculum sp. SN
Brite
KEGG Orthology (KO) [BR:hys00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hys03032]
    HydSN_1643
   03400 DNA repair and recombination proteins [BR:hys03400]
    HydSN_1643
Enzymes [BR:hys01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     HydSN_1643
DNA replication proteins [BR:hys03032]
 Prokaryotic type
  DNA Topoisomerases
   HydSN_1643
DNA repair and recombination proteins [BR:hys03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      HydSN_1643
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3
Other DBs
NCBI-ProteinID: AGH94201
Position
complement(1531525..1533885)
AA seq 786 aa
MQEYGADAIKVVTGLEHVRLRPSMYIGDISERGLHHLIWEIVDNSVDEAMAGYATHIRVH
IHQDDSVTVEDNGRGIPVYIHKDVGKPAVEVVLTVLGAGGKFDKKAYQYSGGLHGVGASV
VNALSEWLIVEVYRDGKIYRQEYERGVPKTELQIMGDTTKRGTKITFKPDAEIFETTKIK
FDIVEKRIRELAYLNKNVTFEIIDDRLNKHLVYKFEKGIIELVEYLAEGKEPLFDDVIYI
ESGKDGTLVEIAFKYTKDYKESLESFVNNIKTIEGGTHVTGFRSGLSKVVSKLSQNIKIS
KELKEMFTGEDLREGLVAVVSCKVPEPQFEGQTKTKLGNQETKNIVESITVEFLTDYFEK
HQDILKLIVEKAIEAALAREAAKKAKDLVRRKSFLEDTSLPGKLADCSEKDPSKCEIFIV
EGESAGGSAKQGRDRRFQAILPLKGKILNVEKARIDKALSNEEIRAIISALGCNIGEDID
LSALRYHKTIIMTDADVDGSHIRTLLLTFFYRFMTKLIENGHVYIAQPPLYKVKIGKKET
YIKDDKELEKFLLNIIRTDLSITDAKSNTYRGDVLINMLNTIKEQHNTIAQILNKRNKDV
ITYLLSNKIDESYLKDEQKAKKLLEDIQSMKSVSSAKLKYDDFDGSYSIVIYDIYQNFSI
IDIDFLTSGTYKKLFEEHKEFFNYPISLKLGHKVKNIEKPVEDLYQDIINFVKDGIEIQR
YKGLGEMNPEQLWETTMNPNTRRLLRVSLEDAAEADRIFSILMGENVEPRREFIETYAKE
VRNLDV
NT seq 2361 nt   +upstreamnt  +downstreamnt
atgcaagaatacggcgcagatgcaataaaagttgttaccggattagaacacgtaagatta
cgcccctcaatgtatataggggatatctccgaaagaggacttcatcaccttatatgggaa
atagtagataactctgttgacgaagcgatggcaggctatgccacacacataagagtgcat
atacaccaagatgattctgtaacggtagaagataatggcagaggtatacctgtttacatc
cataaagacgtaggaaaaccagcggtagaagtggttttaacagtgcttggggctggtgga
aagtttgataaaaaagcttatcaatattcagggggacttcacggtgtaggcgcttccgtt
gtaaacgcactttcagaatggctcatagtagaagtttacagagacggcaagatatacaga
caagagtatgaaagaggagttccaaaaactgagcttcaaataatgggagataccacaaaa
agaggcacaaagattacatttaaaccggacgctgaaatatttgaaaccacaaaaataaag
tttgacatagtagaaaaaagaataagggaattagcttaccttaataaaaacgtaaccttt
gagataatagacgacaggttaaacaaacatcttgtttataaatttgaaaaaggcatcata
gagctggtagaataccttgcagaaggcaaagaaccccttttcgacgacgtaatctatata
gaatctggaaaagatggtactttggtagaaattgcctttaaatatacaaaagattacaaa
gaatctttagaaagctttgtaaacaacataaaaaccatagaaggtggcactcacgtcaca
ggttttagaagtggattgtcaaaggttgtatcaaaactatcccaaaacataaaaatatca
aaagagttaaaagagatgtttaccggtgaagacctaagagagggtcttgtggccgttgta
tcttgtaaagtaccagagcctcagtttgaaggtcaaaccaaaacaaagcttggcaaccaa
gaaacaaaaaacatagtagaatcaataacggtagaatttttaacagattattttgaaaaa
caccaagatattttaaaacttatagtagaaaaagctatagaagcagcgctagcaagagaa
gctgctaaaaaagccaaagatttggtaagaagaaaatcattcttagaagatacatcttta
ccgggtaaacttgccgattgctctgaaaaagacccatcgaaatgtgaaatttttatagta
gagggagaatcagcgggtggttctgcaaaacaaggaagagacagaagattccaagcgata
ttaccactaaagggtaaaatactaaatgtagaaaaagcaagaatagacaaagccctttcc
aatgaagaaataagagcaattatatcagcattaggttgtaacataggagaagatatagat
ctaagcgctcttagatatcacaaaaccataatcatgacagacgctgatgtagatggttct
cacataaggactcttcttcttacttttttctatagatttatgacaaaacttattgaaaat
gggcatgtgtatatagcacaaccacccctttacaaagtaaagatagggaaaaaagaaacc
tacataaaggacgataaagagttagaaaaatttttactaaacatcataagaacagactta
tctataacagacgccaaatcaaacacctacagaggtgatgtactaataaacatgttaaat
actataaaggaacagcacaacaccatagctcaaatactaaacaaaagaaacaaagatgta
ataacatatcttctgtcaaataaaatagatgaaagttatctcaaagatgagcaaaaagcc
aaaaaactcttagaagatatacagtctatgaaaagcgtaagcagtgctaaattaaaatac
gatgattttgatggctcttactctatagttatatacgatatctatcaaaactttagcatt
atagatatagattttcttacttctggtacctacaaaaagctctttgaagagcataaagaa
ttttttaactatcctataagcctaaaacttgggcataaggttaaaaatatagaaaaacca
gtagaagatctttatcaagacataataaattttgtaaaagatggcatagagatacagcga
tacaaaggtcttggtgaaatgaacccagaacagctatgggaaaccaccatgaatccaaac
accagaaggcttttaagggtatccttagaagatgcggcagaagcagatagaatattctct
atactgatgggcgaaaacgtagaaccaaggcgtgagtttatagagacctacgccaaggag
gtaagaaacttagatgtttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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