KEGG   Intestinimonas butyriciproducens: IB211_02249c
Entry
IB211_02249c      CDS       T04182                                 
Name
(GenBank) D-directed RNA polymerase beta subunit
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
ibu  Intestinimonas butyriciproducens
Pathway
ibu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ibu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    IB211_02249c
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ibu03021]
    IB211_02249c
   03400 DNA repair and recombination proteins [BR:ibu03400]
    IB211_02249c
Enzymes [BR:ibu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     IB211_02249c
Transcription machinery [BR:ibu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     IB211_02249c
DNA repair and recombination proteins [BR:ibu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      IB211_02249c
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1
Other DBs
NCBI-ProteinID: ALP94640
UniProt: A0A0S2W6K1
Position
complement(2220305..2224057)
AA seq 1250 aa
MVNDKLNGMVKDVHYGKTLRKSYARHAEILDMPNLLEVQKKSYQWFLDTGLREVFKDVAA
ITDYAGNLELSFIDYKMDEAPKYDVEECKARDATYAAPIKVRVRLRNKETEEIKEQEIFM
GDFPLMTDSGSFVINGAERVIVSQIVRSPGVYFARNEDKAGNVTFGTTVIPYRGAWLEYE
TDLSDIFYVRIDKNRKLPITCLIRAVGPRTDAEIIDMFGEDPRILATMEKDTCKSREEAL
LEIYRKLRPGEPPTVDSSESLLNALFFDPRRYDLSAVGRYKFNKKLAIWGRLNGQKLAQP
IADPMTGEIIAEAGEVLTRERAREIEAKGVNEAVIDLEGTLIKVFSNDMVDAKGFLPFDP
AECGVTEKVYFPLLRELLEQYEGDEEGLKEAVRDRVDDLVPKHIFVEDIMASINYLNCLA
HGVGTHDDIDHLGNRRLRCVGELLQNQFRIGFSRMERVIRERMTIQDLDIVTPQSLINIR
PVTASIKEFFGSSPLSQFMDQTNPLAELTHKRRMSALGPGGLSRDRASFDVRDVHYSHYG
RLCPIETPEGPNIGLISYLASYARINRYGFIETPYRKVDKETGCLTDEIEYMTADVEDEY
IIAQATEPVDESNHLLHDRITCRHRNEIIEVDRDHVDYIDVSPKMMVSVATAMIPFLEND
DANRALMGANMQRQAVPLLTTEAPIVATGQEHKNCIDSGVVILAEGGGEVTKVSAQYITV
RYDDGRVVDYKLTKFMRSNHTTCINQRPIVTAGQRVEKGDVLVDGPSTSQGEIALGKNIL
MGFMTWEGYNYEDAILLNERMVKEDVFTSIHIEEYETESRDTKLGPEEITRDIPNVGEDA
LKDLDERGIIRVGAEVRAGDILVGKVTPKGETDLTAEERLLRAIFGEKAREVRDTSLKVP
HGESGIIVDVKVFTRENGDELSPGVNEVVRVYIAQKRKISVGDKMAGRHGNKGVVSRILP
QEDMPFLPDGTPLDIVLNPLGVPSRMNIGQVLEVHLGYAAKALGWKVATPIFNGANEPEI
EATLTAAGLAKDGKSWLYDGRTGERFDNRVTVGYVYFLKLHHLVDDKIHARSTGPYSLVT
QQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEILTVKSDDVTGRVRTYESIVKGHNVP
KPGVPESFKVLVKELQALCLDIKVLDAKGEEIELKDDDEDTYQPDRIRDDDFYGYNAGGE
SDFAAAGFTLKEGSDDDDLAVADDTDDADEDVGFEEEIVLDDSTDDGDLD
NT seq 3753 nt   +upstreamnt  +downstreamnt
atggtcaacgacaagctgaacggcatggtcaaggacgtacactacggcaagaccctgcgc
aagagctatgcccgccacgcagagatcctggacatgcccaacctgctggaggttcagaag
aaatcctatcagtggtttttggacaccggcctgcgcgaggtctttaaggatgtggccgcc
atcaccgactatgcgggcaacctggagctctcctttatcgactataaaatggatgaggcc
cccaagtacgatgtggaggagtgcaaggccagggacgccacctatgccgcccccatcaag
gtgcgggtccgtctgcggaacaaggagaccgaggagatcaaggagcaggagatctttatg
ggagatttccccctcatgaccgattccggttcctttgtcatcaacggcgccgagcgggtc
atcgtctcccagatcgtccgctcccccggcgtgtactttgcccgaaacgaggacaaggcg
ggcaatgtgaccttcggcaccactgtcatcccctaccgcggcgcgtggctggagtatgag
acggatctgtccgacatcttctacgtgaggatcgacaagaacagaaagctgcccatcacc
tgcctcatccgtgcggtaggcccccggaccgatgcggagatcatcgatatgttcggtgag
gacccccgcatcctggccacgatggagaaggacacctgtaagagccgggaggaggccctc
ctggagatttaccgtaagctccgccccggcgagccccccacggtggattcctcggaatcc
cttctgaatgcgctgttctttgatccccggcggtacgatctctccgctgtgggccgctat
aaattcaataaaaaactggccatctggggccgcctgaacggccagaagctggcccagccc
attgccgatcccatgacgggcgagatcattgccgaggccggtgaggtcctgacccgggaa
cgggcccgtgagatcgaggccaagggcgtcaatgaggctgtgatcgacctggagggcact
cttatcaaggtgttttccaatgatatggtggacgccaagggcttcctccccttcgacccc
gccgagtgcggcgtgaccgaaaaggtgtacttccccctgctccgggagctgctggagcag
tatgagggggatgaagagggcctgaaggaggccgtccgggatcgggtggacgacctggtg
cccaagcacatctttgtggaggacatcatggcctccatcaactacctcaactgtctggcc
catggcgtgggtacccacgacgacatcgaccacctggggaaccgccgcctgcgctgcgta
ggcgagctgctccagaatcagttccgcatcgggttcagccgcatggagcgcgtgatccgt
gagcgcatgaccatccaggatctggatattgtcaccccccagagcctcatcaatattcgc
ccggtcactgcgtccatcaaggagttcttcggctcctcccctctgagccagtttatggat
cagaccaacccgctggcggagctcacccacaagcggcgtatgtccgccctgggccccggc
ggtctgtcccgtgaccgcgcctccttcgatgtccgggacgtccactacagccattacggc
cggctgtgtcccattgagacgcccgaaggacccaacatcggcctcatttcctatctggcc
tcctatgcccgcatcaaccggtacggctttattgagaccccctaccgcaaggtggacaag
gagaccggctgccttaccgatgaaatcgaatatatgaccgccgatgtggaggatgaatat
atcatcgcccaggccaccgagcccgtggacgagagcaatcatctgctgcatgaccgtatc
acctgccgccaccgcaatgagatcatcgaggtggaccgcgaccatgtggactatatcgac
gtctcccccaagatgatggtctccgtggctaccgccatgatccccttcctggagaatgac
gatgccaaccgcgccctgatgggcgccaacatgcagcggcaggccgtgcccctgctcacc
accgaggcccccatcgtggccaccggccaggagcacaaaaactgcatcgattccggtgtg
gtcattctggcggagggcggcggtgaggtcaccaaggtttccgcccagtatatcaccgtc
cgttacgacgatggtcgggtagtggactacaagctgaccaagttcatgcgctccaaccac
accacctgtatcaatcagcggcccatcgtcaccgccggacagcgggtggagaagggggat
gtcctggtggacggcccctccaccagtcagggagagatcgcgctgggcaagaacatcctt
atgggctttatgacgtgggagggctacaactacgaagacgccatcctgctcaacgagcgt
atggtcaaggaggacgtgttcacctccatccatatcgaggagtatgagaccgagtcccgg
gacaccaagctggggcccgaggagattacccgggatatccccaacgtgggcgaggatgcg
ctgaaggatctggacgagcggggcatcatccgcgtgggcgccgaggtccgtgccggcgat
atcctggtgggcaaggtcacgcccaagggcgagaccgacctcaccgccgaggagcggctc
ctccgcgccattttcggcgagaaggcccgcgaggtccgcgacacctccctgaaggtcccc
cacggagagagcggcatcatcgtggacgtgaaggtgttcacccgggagaacggcgacgag
ctctcccccggcgtcaacgaagtggtccgtgtctatattgcccagaagcgtaagatcagc
gtgggcgacaaaatggccggccgccacggcaataagggcgtcgtctcccgcatcctgccc
caggaggatatgcccttcctgcccgacggcacgccgctggacatcgtcctcaatcccctg
ggcgtgccctcccgtatgaacatcgggcaggtgctggaggtccacctgggctatgcggcc
aaggccctgggctggaaggtggccacacccatcttcaatggtgccaacgagcccgagatc
gaggccacgctcactgcggccggccttgccaaggacggtaagagctggctttatgacgga
cgcaccggcgagcggtttgacaaccgcgtcaccgtgggctacgtctacttcctcaagctc
catcacctggtagacgacaagatccacgcccggtccaccggcccctacagcctggtcact
cagcagcccttgggcggcaaggcccagttcggcggacagcgcttcggcgagatggaggtc
tgggccctggaggcctatggcgcggcctacacgcttcaggagatccttaccgtcaagtcc
gacgatgtgaccggccgtgtccggacctatgagtccatcgtcaagggccataacgtgccc
aagcccggtgtgcccgagtccttcaaagtgctggtcaaggagcttcaggcactgtgcctg
gacatcaaggtgctggatgccaagggcgaggagatcgagctcaaggacgacgatgaggac
acctaccagcctgaccgtatccgggacgacgacttctacggctataacgccggcggtgag
tccgatttcgccgcggccggctttacgctcaaggagggcagtgacgatgacgacctggcg
gtggccgacgacactgacgacgccgatgaggacgtcggattcgaggaagagatcgtcttg
gacgacagtaccgacgacggtgatttggactga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (89)   
   KEGG ORTHOLOGY (1)   
   RefGene (86)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (103)   

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